Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01818 ATGTTGTTTCAGATTCCTCGCCTCACCAACTCTCTCAGAGATCCCTTCGACGTGGACCAGTACTATCTTCATCGCAAAACCATTCTCCACAACCAAAAACCTAGCAATTCCGCAAGTTCACTCGATGAATCGGAACTGGCGCGGAAGATTGTGCACGGGTGGGAAAAAGCTTCGTCGGACGTGCGGCAGGCCTACAAGCAGTTTATAGGAGCGGTGGTGGACTTGGTTGACGGAGAAACGCGCTCCGAGGAGTTCCACGAGGTGGCGCTGACTATGTACCGGCTATTTGGCAGGCCAATGGAGGAGGAGGATCACATTGATAAAATTATTTCAGATAAAAAGTTAGAATTACAAAAACTTGTTGGACGCACAGTTACTGATGCCAAGTTGAGGCAAGTTGCATCTCTAGCACAGCGACTTTTAAATTTGCAGCCGAGCAATAAAAACTCTGCCATTTCTTTTGAAAGAAATCTAGATGCTAACGAGGATTTAGAATTTGGAGCTGATTTGTTTTTTCAAGCACCAGCTCGTTTCTTGGTTGATGTATCCTTAGATGATGGGGATATGATGGATTTTGAAAGCACTGTTTCATTAGAATTTCACAAAGAACAGTATGGCCATAATGTCCCAACAGATCATTCTGTTGTTAACAGGGAAAAGTTCAACCTGACTTGGTTACGAGATGCATGTGATAAAATAGTTAAGAATTGTAATTCACAATTATCCCAAGATGAATTGGCAATGGCCATTTGTCGGGTTCTTTATTCCGAAAAGCCTGGTGAAGAGATAGCTGGAGATCTGTTGGATCTTGTTGGCGATAGTGCATTTGAAACTGTGCAAATTTTTTTATTGCATCGAAAGGAGATTGTTGATTCTATTCATCATGGCTTATTGGTATTGAAGTCTGATAAAAATGCTTCAAATGCTCAGTCTCGCATGCCTAGTTATGGAACACAGGTGACTGTTCAAACAGAATCAGAAAAGCAAATTGACAAGCTTCGACGCAAGGAGGAAAAACGAAATAGACGGGGAGTAGAACATGCTGGTGATGGTGAATTGTCTGCACTGGATTTCTCATCTTTACATCAAGCAAGTGAGAGGAAAAAAATGTTTGATGAGATGATTGGTTCTGGAGATAAGTTCGAGTCAATAGCTGTTACTGCTCTTCCTGAAGGAACTGTAAGGAAGCATTTTAAGGGGTATGAAGAGGTTAATATTCCCCCAAAACCAACTGCACCATTGAAACCTGGAGAAAAGCTGATTGAAATCAGGGAGTTAGATGACTTTGCACAAGCTGCGTTCCGTGGGTACAAATCACTTAATCGCATTCAGAGCAGGATTTTTCCAACTGTTTATGGAACTAATGAGAATATTTTAGTGTGTGCTCCCACAGGAGCGGGCAAAACTAACATAGCTATGGTTTCCATTTTACACGAGATTGGACAACACTTTAGGGATGGCTACTTGCATAAAGAAGAATTTAAGATAGTTTATGTTGCTCCAATGAAGGCTTTGGCTGCAGAAGTTACATCAACATTCAGCCAACGTTTATCTCCTTTGAATATGATTGTCCGAGAGCTTACTGGAGATATGCAGCTCTCTAAAAATGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTCATTACACGCAAGAGCAGTGACATGTCACTGTCAATGCTGGTAAAGCTCTTAATTATTGATGAAGTCCATCTACTCAATGATGATAGAGGTCCTGTGATAGAGGCTCTAGTTGCCAGGACCCTACGGCAGGTGGAATCTACTCAGACAATGATACGCATTGTGGGCCTTTCTGCCACTCTTCCCAATTACTTGGAGGTTGCACAATTTCTCAGGGTAAATCCAGACACGGGTCTTTTCTTCTTTGATTCTAGTTATCGTCCTGTGCCTCTTGCACAACAGTATATTGGAATTAGTGAGCCAAACTTTGCAGCTCGTAATGAATTGTTGAATGATATATGCTATACAAAGATTGCTGATTCTCTTAGGCAAGGCCATCAGGCAATGGTGTTTGTCCATTCACGAAAGGACACTGCAAAGACAGCTGATAAACTGGTTGAACTAGCACGAAGGAATGAGGATTTTGAACTTTTTAGTAATAATACACATCCACAATATACCTTCATGAAGAAAGAAGTCATTAAATCCAGAAACAAAGATCTTGTGCAACTTTTTGAATATGGTGTGGGTGTACATCATGCTGGGATGCTACGTGCAGATAGAGGACTTACTGAGCGACTTTTCTCCGATGGACTTCTGAAGGTTCTTGTCTGTACAGCAACTTTGGCATGGGGTGTCAATCTACCTGCACACACAGTTGTCATTAAGGGTACCCAATTATATGATCCAAAAGCTGGTGGGTGGCGAGACCTGGGTATGCTTGACGTTATGCAGATATTTGGGCGAGCTGGAAGACCTCAGTTTGACAAAAGCGGTGAAGGTATCATAATTACATCTCATGACAAACTAGCATATTATCTGCGACTGCTGACAAGCCAACTCCCTATAGAAAGCCAGTTTATTAGCTCCTTGAAAGATAATTTAAATGCAGAGGTGGCATTGGGTACTGTAACTAATGTTAAGGAAGCCTGTGCATGGCTTGGCTATACATATCTTTTCATAAGGATGAGGATGAATCCTTTAGCATACGGTATTGGGTGGGATGAGGTGATGGTGGATCCTGCTTTGAGTTCTAAGCAAAGATCTCTTGTAATTGATGCTGCACGTGCACTTGATAAAGCAAAAATGATGCGGTTTGATGAGAAAAGTGGCAATTTTTATTGTACTGAGCTTGGTCGCATTGCGAGCCATTTTTACATTCAATATTCCAGTGTTGAAACGTACAATGAAATGTTGAGACGCCACATGAATGACAGTGAGGTGATTAACATGATTGCACATTCATCTGAATTTGAGAATATTGCTGTTCGGGAAGAAGAACAGAATGAGCTAGAGATGTTGGCACGCACATCATGTCCATTAGAAATTAAGGGTGGTCCTTCCAATAAACATGGAAAGATTTCCATTTTGATTCAGTTGTACATATCTCGAGGTTCTATAGATTCTTTTTCTTTAGTATCTGATGCTTCATATATAAGTGCAAGCTTGGCTAGAATAACACGGGCTTTATTTGAGATTTGCTTACGAAGAGGCTGGTGTGAGATGTCTTTGTTCATGTTGGAATATTGCAAAGCTGTGGATCGCCAAATATTGCGGAAGCTTGAAGAACGTGGGGCTGACCTAGACCGCTTGTATGAGATGGAGGAAAAAGACATTGGGGCATTAATTCGTTATGCGCCTGGAGGAAGGTTGGTCAAGCAACACCTAGGGTATTTTCCATCACTTCAGTTATCAGCAACTGTGAGTCCAATTACCAGAACTGTGTTGAAGGTTGATCTGGTCATTACGCCTGTTTTCATTTGGAAAGATCGTTTTCATGGTACTGCTCAACGTTGGTGGATTTTGGTAGAGGATTCTGAGAATGACCACATCTACCACTCTGAACTCTTTACGCTGACAAAGCGAATGGCTAGGGGTGAACCTTACAAGCTTTCCTTCACCGTACCAATATTTGAACCACATCCACCACAATATTACATTCATGCTATTTCTGATTCTTGGCTTCATGCCGAGGCATTCTACACTATTACTTTTCACAATTTACCATTGCCAGAGGCTCGTACTGCTCACACAGAACTCCTTGATTTAAAACCGCTTCCCATGTCTTCCCTTGGCAACAGTACTTATGAAGCATTATATAAATTTTCACATTTTAATCCTATACAAACACAGACTTTTCATGTCCTGTATCACACGGACAATAATGTTCTGTTAGGAGCTCCAACTGGAAGTGGAAAAACTATATCTGCTGAGCTTGCCATGCTTCGTCTTTTTAATACTCAGCCTGATATGAAGGTTATTTATATAGCTCCTTTGAAAGCTATTGTCAGGGAAAGAATGAGTGATTGGCAAAAGCGTCTTGTCTCTCAGCTAGGGAAAAAGATGGTTGAAATGACTGGAGACTATACTCCTGATTTGACGGCTCTCTTGTCGGCCAATATCATCATATCTACTCCTGAAAAGTGGGATGGAATAAGTCGTAATTGGCATAGCCGTAGCTATGTCACAAAGGTTGGACTTATGATATTGGATGAGATTCACTTATTGGGGGCTGATCGTGGACCCATTCTTGAGGTTATTGTTTCTAGGATGAGATACATATCATCCCAAACAGAACGTGCAGTACGGTTTGTAGGTCTTTCTACAGCTCTGGCTAATGCTGGTGATCTAGCTGATTGGTTAGGCGTTGAGGAAATTGGACTCTTCAATTTCAAGCCAAGTGTGAGGCCTGTACCCCTGGAAGTTCATATTCAGGCAAGTGGATTTGGT 4425 0.4154 MLFQIPRLTNSLRDPFDVDQYYLHRKTILHNQKPSNSASSLDESELARKIVHGWEKASSDVRQAYKQFIGAVVDLVDGETRSEEFHEVALTMYRLFGRPMEEEDHIDKIISDKKLELQKLVGRTVTDAKLRQVASLAQRLLNLQPSNKNSAISFERNLDANEDLEFGADLFFQAPARFLVDVSLDDGDMMDFESTVSLEFHKEQYGHNVPTDHSVVNREKFNLTWLRDACDKIVKNCNSQLSQDELAMAICRVLYSEKPGEEIAGDLLDLVGDSAFETVQIFLLHRKEIVDSIHHGLLVLKSDKNASNAQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRNRRGVEHAGDGELSALDFSSLHQASERKKMFDEMIGSGDKFESIAVTALPEGTVRKHFKGYEEVNIPPKPTAPLKPGEKLIEIRELDDFAQAAFRGYKSLNRIQSRIFPTVYGTNENILVCAPTGAGKTNIAMVSILHEIGQHFRDGYLHKEEFKIVYVAPMKALAAEVTSTFSQRLSPLNMIVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAARNELLNDICYTKIADSLRQGHQAMVFVHSRKDTAKTADKLVELARRNEDFELFSNNTHPQYTFMKKEVIKSRNKDLVQLFEYGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMVDPALSSKQRSLVIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVINMIAHSSEFENIAVREEEQNELEMLARTSCPLEIKGGPSNKHGKISILIQLYISRGSIDSFSLVSDASYISASLARITRALFEICLRRGWCEMSLFMLEYCKAVDRQILRKLEERGADLDRLYEMEEKDIGALIRYAPGGRLVKQHLGYFPSLQLSATVSPITRTVLKVDLVITPVFIWKDRFHGTAQRWWILVEDSENDHIYHSELFTLTKRMARGEPYKLSFTVPIFEPHPPQYYIHAISDSWLHAEAFYTITFHNLPLPEARTAHTELLDLKPLPMSSLGNSTYEALYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVRERMSDWQKRLVSQLGKKMVEMTGDYTPDLTALLSANIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERAVRFVGLSTALANAGDLADWLGVEEIGLFNFKPSVRPVPLEVHIQASGFG 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01818 1475 SMART AAA_5 454 635 IPR003593 -
Gma06g01818 1475 SMART AAA_5 1284 1455 IPR003593 -
Gma06g01818 1475 Coils Coil 1083 1103 - -
Gma06g01818 1475 CDD DEXHc_ASCC3_1 439 635 - -
Gma06g01818 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 624 IPR027417 -
Gma06g01818 1475 Gene3D C2 domain 1124 1233 IPR035892 -
Gma06g01818 1475 MobiDBLite consensus disorder prediction 308 348 - -
Gma06g01818 1475 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1279 1454 IPR014001 -
Gma06g01818 1475 PANTHER ANTIVIRAL HELICASE SLH1 194 1471 - -
Gma06g01818 1475 SMART Sec63_2 940 1230 IPR004179 -
Gma06g01818 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1156 1454 IPR027417 -
Gma06g01818 1475 Gene3D - 428 639 IPR027417 -
Gma06g01818 1475 MobiDBLite consensus disorder prediction 327 348 - -
Gma06g01818 1475 SMART ultradead3 436 647 IPR014001 -
Gma06g01818 1475 SMART ultradead3 1266 1470 IPR014001 -
Gma06g01818 1475 Gene3D - 1078 1121 - -
Gma06g01818 1475 Pfam Sec63 Brl domain 940 1228 IPR004179 -
Gma06g01818 1475 Pfam Helicase conserved C-terminal domain 699 817 IPR001650 -
Gma06g01818 1475 Pfam DEAD/DEAH box helicase 442 615 IPR011545 GO:0003676|GO:0005524
Gma06g01818 1475 Gene3D - 1235 1461 IPR027417 -
Gma06g01818 1475 MobiDBLite consensus disorder prediction 308 326 - -
Gma06g01818 1475 Gene3D - 941 1077 - -
Gma06g01818 1475 CDD SF2_C_Ski2 639 830 - -
Gma06g01818 1475 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 666 864 IPR001650 -
Gma06g01818 1475 SMART helicmild6 727 819 IPR001650 -
Gma06g01818 1475 PANTHER DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED 194 1471 - -
Gma06g01818 1475 Gene3D - 849 940 IPR036388 -
Gma06g01818 1475 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 449 631 IPR014001 -
Gma06g01818 1475 Pfam DEAD/DEAH box helicase 1272 1436 IPR011545 GO:0003676|GO:0005524
Gma06g01818 1475 Gene3D - 640 842 IPR027417 -
Gma06g01818 1475 SUPERFAMILY "Winged helix" DNA-binding domain 847 952 IPR036390 -
Gma06g01818 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 634 847 IPR027417 -
Gma06g01818 1475 CDD DEXHc_ASCC3_2 1269 1457 - -
Gma06g01818 1475 SUPERFAMILY Sec63 N-terminal domain-like 968 1125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01818 Gma-Chr6 19080525 19128474 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01818 K18663 - gmx:100811503 2900.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01818 06 19080525 19128474 Gma06g01818 06 19080525 19128474 ECH