Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01765 ATGCTAAAGCGTGGCTTGCACCCTGATGTTGTCACTTTTGCTACTTTGATAGATGTTCTACGCAAAATGGGGGATTTGAAGGCTGCGCAAAACTGTTTTGGTTATATGGCAGAGTTTGATGTTGTTCCTAATGCCCATGCTTATAATTCTTTGATTGATGGGTATTGTAAGGCAGGGAACTTGCCCGAAGCAATGCAATTGCGGGTGGAAATGGAAAGGTGTGGAATCTTCCCTGATGTTGTCACATACAATATACTCATCAAGGGTCTGTGTGGCTCGGGTAGATTGGAAGAAGCTACGAGTTTGATAGAGAAAATGGATGAAGTTGCGGTTCTTGCCAATTCTGCGACGTACAATGTGGTGATTGATGGATTCTATAAAACAGGTGACATGGAGAAGGCTATTGAGGCATGCTCCCAAACGACTGAAAGGAAAATTGAACCTAATGTTATCACGTTTTCGACATTGATTGATGGGTTTTGCCAGAAAGGTAACGTAAAAGCTGCAATGGGCTTGTACACAGAAATGGTAATCAAGGGTATTGTGCCTGATGTGGTAACTTACACGGCTTTGATTGATGGACACTGCAAGGTTGGGAAAACCAAAGAGGCTTTCAGGTTGCACAAGGAGATGCTGGATGCAGGACTAACGCCCAATGTGTTCACAGTTAGTTGTGTAATTGATGGCCTTTTGAAAGATGGAAAGACGAATGATGCAATCAAACTGTTCTTGGAGAAAACTGGAGCTGGTTGCCCTGGTGGTAAAATCGATAGCAGGTTTTGTTCTCTAAACAGTGTGATGTATGCCATTTTAATTCAAGGATTATGTAAAGATGGATGGATCTTTAAGGCCACTAAGTTTTTTGCGGAAATGAGATAG 879 0.4221 MLKRGLHPDVVTFATLIDVLRKMGDLKAAQNCFGYMAEFDVVPNAHAYNSLIDGYCKAGNLPEAMQLRVEMERCGIFPDVVTYNILIKGLCGSGRLEEATSLIEKMDEVAVLANSATYNVVIDGFYKTGDMEKAIEACSQTTERKIEPNVITFSTLIDGFCQKGNVKAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGKTKEAFRLHKEMLDAGLTPNVFTVSCVIDGLLKDGKTNDAIKLFLEKTGAGCPGGKIDSRFCSLNSVMYAILIQGLCKDGWIFKATKFFAEMR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01765 292 Pfam PPR repeat family 148 197 IPR002885 -
Gma06g01765 292 Pfam PPR repeat family 43 91 IPR002885 -
Gma06g01765 292 Gene3D Tetratricopeptide repeat domain 214 292 IPR011990 GO:0005515
Gma06g01765 292 Gene3D Tetratricopeptide repeat domain 1 70 IPR011990 GO:0005515
Gma06g01765 292 Gene3D Tetratricopeptide repeat domain 71 139 IPR011990 GO:0005515
Gma06g01765 292 Gene3D Tetratricopeptide repeat domain 140 213 IPR011990 GO:0005515
Gma06g01765 292 PANTHER OSJNBA0060P14.6 PROTEIN 1 292 - -
Gma06g01765 292 Pfam PPR repeat 117 136 IPR002885 -
Gma06g01765 292 SUPERFAMILY HCP-like 21 216 - -
Gma06g01765 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 44 78 IPR002885 -
Gma06g01765 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 149 183 IPR002885 -
Gma06g01765 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 114 148 IPR002885 -
Gma06g01765 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 79 113 IPR002885 -
Gma06g01765 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 9 43 IPR002885 -
Gma06g01765 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 264 292 IPR002885 -
Gma06g01765 292 TIGRFAM PPR: pentatricopeptide repeat domain 266 292 IPR002885 -
Gma06g01765 292 TIGRFAM PPR: pentatricopeptide repeat domain 47 80 IPR002885 -
Gma06g01765 292 TIGRFAM PPR: pentatricopeptide repeat domain 81 108 IPR002885 -
Gma06g01765 292 TIGRFAM PPR: pentatricopeptide repeat domain 151 185 IPR002885 -
Gma06g01765 292 TIGRFAM PPR: pentatricopeptide repeat domain 117 150 IPR002885 -
Gma06g01765 292 TIGRFAM PPR: pentatricopeptide repeat domain 186 220 IPR002885 -
Gma06g01765 292 Pfam PPR repeat 261 292 IPR002885 -
Gma06g01765 292 Pfam PPR repeat 215 243 IPR002885 -
Gma06g01765 292 Pfam PPR repeat 4 36 IPR002885 -
Gma06g01765 292 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 184 218 IPR002885 -
Gma06g01765 292 PANTHER ATPASE EXPRESSION PROTEIN 3 1 292 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01765 48 292 Miscellaneous Gene Families AT4G11690 25.306 1.12e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01765 - - gmx:100776422 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01765 06 18022322 18023200 Gma06g01765 06 18022322 18023200 ECH