Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01679 ATGGATTCTTCTCCTTCACCAGACATAAACATCCCAGAGCAGTGGTTAGAGGCCACAGAGTCCATTGCAAACAGTTCAATGCCTCCTATTACTCTTATATGTGGTGCCAAGAATTGTGCGAAGACAACCTTCTCCCGCTATCTCCTAAATGTCCTCTTGAACAAATACACCAAAGTAGCTTATCTGGATACTGATGTTGGCCAACCCGAGTTTACTCCTCCTGCTTTTCTGTCACTAACCATTGTTCATAAAGTAACTTCAGATTTGACAGTTCCATGCCTGAAAACACCGGAGAGGTGCCTTTTCTTTGGTGATGTTTCTTGTAAGAGAGATCCATCAACATACTTAAGTTATGTATTTGCCATATATAATTATTACCGAAAGGAGTATTGCATCTCAGATAAGGGAGAATATCCTCATAAGATCGAAGTTCCTCTTATCGTGAATACTCCTGGTTGGGTGAAAGGTAAGCTCAATTCCTTTTCAGTGGTTATGGACATGTTGAAATATATTTGTCCTACACATGTAGTTAAGATAAGCATATCCAGTGAAAAAAAGAATTTACCTGCTGGAGAATTTTGGTCAGATGGGGAACATGATGAAACAATTAACTTAATTGAGATAAATTCAGCTCATCAGGACTCGTTAACTAGATCGGTGCTTGTTCAGATAGATGCACGCCTACTGCGTGATTTACGAATATTGACTTATTTCAAACAGTGCTTTTCTAGTGATTCAAATATTTCTACAATCAAGGAACTTGCACATGCCTTAGCCTCTCATTGTCCTTATGAGGTTCCCATTGCAAGCATAAAGATTCAACACCTTCATTGTGAGGTCCCAAGTTCTGAGATATTCTACAGTTTGAATGCTACCGTTGTTGGCTTAGCTGTTGATTCTCATGGACCTGAAAATTTACCTTGGTGTCTTGGGCTTGGGATTGTGAGGGGCATTGACACAGTAAAAGGTGTGCTCTATGTCATTACTCCTGTGCCACATAGTTCTCTGGAAAGAGTCAACCTCTTGCTACAGGGTTATATCCAAATTCCCTCTTGTTTATTGCAGGCAAGAAATTTTTTACATTCTTTTACTTTCTCATTAACATAA 1107 0.393 MDSSPSPDINIPEQWLEATESIANSSMPPITLICGAKNCAKTTFSRYLLNVLLNKYTKVAYLDTDVGQPEFTPPAFLSLTIVHKVTSDLTVPCLKTPERCLFFGDVSCKRDPSTYLSYVFAIYNYYRKEYCISDKGEYPHKIEVPLIVNTPGWVKGKLNSFSVVMDMLKYICPTHVVKISISSEKKNLPAGEFWSDGEHDETINLIEINSAHQDSLTRSVLVQIDARLLRDLRILTYFKQCFSSDSNISTIKELAHALASHCPYEVPIASIKIQHLHCEVPSSEIFYSLNATVVGLAVDSHGPENLPWCLGLGIVRGIDTVKGVLYVITPVPHSSLERVNLLLQGYIQIPSCLLQARNFLHSFTFSLT 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01679 368 Pfam mRNA cleavage and polyadenylation factor CLP1 P-loop 35 239 IPR032319 -
Gma06g01679 368 PANTHER OS01G0354700 PROTEIN 10 364 - -
Gma06g01679 368 Gene3D - 11 243 IPR027417 -
Gma06g01679 368 PANTHER CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P 10 364 IPR045116 GO:0006396|GO:0051731
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01679 Gma-Chr6 16796811 16800066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01679 K06947 - gmx:100793271 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01679 06 16796811 16800066 Gma06g01679 06 16796811 16800066 ECH