Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01646 ATGGAGAATCATCCTTCAGGCCGTGTGATCAGCAATGGTAAAATTGGTTTCTCTACTCCAAATTGCACACATGAACGAGATGATGAGGAACCTGAAATTCGTGTACATCCACAAATTCCAGAGTGGTTTTCAGAGAATTCTCCATTATGGCCAGGCCAAGCACACTTCTTGAAGGTAGAAAAGATTTGTTTCCAAGGGAAATCTGAATACCAGAATATGCTAGTTTTTCAGTCATCAACATATGGTAAGGTTTTTGTCCTTGATGGAGCCCTCCAACTCACAGAGAAGGACGAATGTGCTTACCAAGAAATGATGACTCACCTTCCACTTTGCTCTATCCCTAGCCCAAAAAAGGTGCTGCTTATTGGTGGTGGAGATGGTGGTATCCTAAGGGAAATTTCCCGCCACTCGTCTGTTGAACAAATCGACATATGTGAAATAGACACAATGCTGATTGATGTCTATAAAGAATTTTTCCCAGACGTGGCTGTTGGATACAAGGACCCTCGAGTCAAGCTTCATATTATAGATGCAGGAACTCTTTTTTTGAATTCTGTCCCAAAAGGGATGTATGATGCAATAATAGTGGATGCCTTCGACCCAATAAGGCCTGATCATGAGCTTTTTGAATCTGAGTTCTTTGAACTGGTTTCAAAGGCTCTTCGTCCAGGAGGAGTATTGTGCATCCAAGCAGAGAGTATTTGGTTTCATTCCTTGGATATCGAAGAACTCCTCACCAAATGCCGCCAAACTTTCAAAGGCTCCTCTGATTATGCATGGACAACTGTCCCTGCATATCCAAGGCAAGCTTCATTCAACAATCCTTCTGTTTCACGTTTTGGGGTCATTGGTTTCTTGCTATGTTCCACCGAAGGTCCATTTGTCGACTTCAGAAATCCAATTAACCCGATCGATCCCGAAAATTATGGCATATCAAAGCAACCCTTGAAGTTTTACAACTCAGAA 966 0.4224 MENHPSGRVISNGKIGFSTPNCTHERDDEEPEIRVHPQIPEWFSENSPLWPGQAHFLKVEKICFQGKSEYQNMLVFQSSTYGKVFVLDGALQLTEKDECAYQEMMTHLPLCSIPSPKKVLLIGGGDGGILREISRHSSVEQIDICEIDTMLIDVYKEFFPDVAVGYKDPRVKLHIIDAGTLFLNSVPKGMYDAIIVDAFDPIRPDHELFESEFFELVSKALRPGGVLCIQAESIWFHSLDIEELLTKCRQTFKGSSDYAWTTVPAYPRQASFNNPSVSRFGVIGFLLCSTEGPFVDFRNPINPIDPENYGISKQPLKFYNSE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01646 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 41 291 IPR029063 -
Gma06g01646 322 MobiDBLite consensus disorder prediction 1 30 - -
Gma06g01646 322 Hamap Polyamine aminopropyltransferase [speE]. 41 321 IPR001045 GO:0003824
Gma06g01646 322 Pfam Spermine/spermidine synthase domain 98 269 - -
Gma06g01646 322 Gene3D Vaccinia Virus protein VP39 95 322 IPR029063 -
Gma06g01646 322 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 40 290 IPR030374 -
Gma06g01646 322 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 119 132 IPR030373 -
Gma06g01646 322 Pfam Spermidine synthase tetramerisation domain 42 95 IPR035246 -
Gma06g01646 322 Gene3D Spermidine synthase, tetramerisation domain 24 94 IPR037163 -
Gma06g01646 322 PANTHER SPERMIDINE SYNTHASE 41 322 - -
Gma06g01646 322 PANTHER SPERMIDINE/SPERMINE SYNTHASE 41 322 IPR001045 GO:0003824
Gma06g01646 322 CDD AdoMet_MTases 140 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01646 Gma-Chr6 16284668 16288549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01646 K00797 - gmx:100785862 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01646 06 16284668 16288549 Gma06g01646 06 16284668 16288549 ECH