Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01565 ATGACGATCACCGCGGCGCCGACGGTGAAGGACAGGTGCCTTGAGGTGAGGGGCAAGGTGATTTTGACCCATGTCACCGGAAACATTGTTGTTTCTCCGGTGGTTGGAACAGAGTCTGCTTTCTTGGGTGCAACTTCAACCGTTTCAAGTTCACGTCATGTTTTTGATCTTGGAATACTCCAGGGATATAAGTTGCTATCTTTGTTCAGAGTCAAAATCTGGTGGATGATACCACCTGTAGGGAGATCTGCAAAAAGAGAAGAGTCTGCGCTTGAGGATGAGTTTTCTTCTGACTCTGAAGAGCCAACTACAGAGAACACTTGCTACATTCTCCTTTTGCCTGTTTTGGATGGACAGTTTCGCACAACTTTGCAGGGAACTCAATCAAATGAGCTCCAGCTCTGCATTGAAAGAGATGCTTATGTTCAAGCTTCCCAATCACTAGAAGCAGCATTTGTGAATTCAGGGGACAATCCATTTGAGTTGATCAGGGACTCTATCAAAATATTGGAGAAACACAAAGGGACTTTCTGTCATCTTGAAAACAAGAGGATTCCTGCACATCTTGACTGGTTTGGATGGAGCACTTGGGATGCTTTTTACACTGAAGTGAGTCCACAAGGAATAAAAGAGGGCCTTCAGAGTTTCTTAAATGAAGGTTGTTCGCCAAAGTTCATCATCATTGATGATGGATGGCAAGAGACCCTCAACACGTTTCGCAAAGAAGGTGAATCAGTGATTGAGGGAACCCAGTTTGCAACCAGACTGATAGACATTAAAGAAAACAAAAAGTTCACCAATGCAGGCTCCGAAAATTCTTGTAACAATCTCCACGATTTTGTTGATTCCATCAAACAGAATATGAATGTAAAATACGTTTACATGTGGCATACTTTAACTGGTTACTGGGGAGGTGTACTCCCATCATCAGATGCATTGAAAAAATATAATCCAAAGATTTTATATCCAATTCAGTCACCTGGAACCACAGGGAACCTTAGAGATGTAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATCATTGACCCAGAAAAACTATATGACTTTTACAATGATTCCCACAGTTACCTTGCAAGCTGTGGTGTAGATGGAGTCAAATTCAAGAATAGTGCAGCAGCAAGAGCATCTGAGGATTTCATGCCAAGAGAACCAACATTTCAAACCTTACACATCGCCTCTGTCGCATTTAACAGTCTTCTTCTTCTGGGAGAGAGCAAGCACGAGACAGCCGAGTCCCATGCTGCAGCAAGATCAATAGGTGGTTGTGCAGTATATGTTAGTGACAAGCCTGGAAATCATGATTTTAAAATCCTGAAGAAGCTAGTGCTGCCTGATGGATCAGTCTTGAGAGCAAGATATGCCGGCCACCCTACTCGAGATTGTTTATTTGAAGATCCTGTAATGGATGGTAAAAGTCTGCTGAAAATTTGTAATTTAAATGTTCTGACTGGGGTGGTAGGCGTCTTCAATTGCCAAGGAGCAGGAAGCTATATATGCCTTCAAGGCTTGCTTTCCAAGGTGTCTTGCAGAGGAAAACTTGAAGTATCCCTGGAAACTCTCCAATGTGAAATATATACAGTATCTCCAATAAGGGTGTTTGGTCATGATGTGCAATTTGCACCAATAGGATTGCTTGACATGTACAATTCAGGAGGAGCAATAGAAGCCTTGGACTGCACCATGGATGTTGCACAGTGCGTAGTAAAAATCAAAGGCAGAGGATGTGGCCGTTTTGGAGCCTACTCCAACGTTAGACCGAAAAGTTGTGTAGTGGACATGAAGGAGGAGGAGTTCTCCTACATCCCTGAAGATGGATTATTGACTATTACACTTGGTTGTGAAGGCAATTCAAGGGACATGGAATTTGTATACTGA 1899 0.4286 MTITAAPTVKDRCLEVRGKVILTHVTGNIVVSPVVGTESAFLGATSTVSSSRHVFDLGILQGYKLLSLFRVKIWWMIPPVGRSAKREESALEDEFSSDSEEPTTENTCYILLLPVLDGQFRTTLQGTQSNELQLCIERDAYVQASQSLEAAFVNSGDNPFELIRDSIKILEKHKGTFCHLENKRIPAHLDWFGWSTWDAFYTEVSPQGIKEGLQSFLNEGCSPKFIIIDDGWQETLNTFRKEGESVIEGTQFATRLIDIKENKKFTNAGSENSCNNLHDFVDSIKQNMNVKYVYMWHTLTGYWGGVLPSSDALKKYNPKILYPIQSPGTTGNLRDVAMDSLEKYGVGIIDPEKLYDFYNDSHSYLASCGVDGVKFKNSAAARASEDFMPREPTFQTLHIASVAFNSLLLLGESKHETAESHAAARSIGGCAVYVSDKPGNHDFKILKKLVLPDGSVLRARYAGHPTRDCLFEDPVMDGKSLLKICNLNVLTGVVGVFNCQGAGSYICLQGLLSKVSCRGKLEVSLETLQCEIYTVSPIRVFGHDVQFAPIGLLDMYNSGGAIEALDCTMDVAQCVVKIKGRGCGRFGAYSNVRPKSCVVDMKEEEFSYIPEDGLLTITLGCEGNSRDMEFVY 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01565 632 Pfam Raffinose synthase or seed imbibition protein Sip1 376 503 IPR008811 -
Gma06g01565 632 Pfam Raffinose synthase or seed imbibition protein Sip1 15 375 IPR008811 -
Gma06g01565 632 Pfam Raffinose synthase or seed imbibition protein Sip1 518 618 IPR008811 -
Gma06g01565 632 PANTHER OS04G0481100 PROTEIN 376 507 - -
Gma06g01565 632 SUPERFAMILY (Trans)glycosidases 185 461 IPR017853 -
Gma06g01565 632 PANTHER - 376 507 IPR008811 -
Gma06g01565 632 PANTHER OS04G0481100 PROTEIN 2 377 - -
Gma06g01565 632 PANTHER OS04G0481100 PROTEIN 509 632 - -
Gma06g01565 632 Gene3D Aldolase class I 187 433 IPR013785 -
Gma06g01565 632 PANTHER - 2 377 IPR008811 -
Gma06g01565 632 PANTHER - 509 632 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01565 Gma-Chr6 15207032 15211667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01565 1 620 Glycoside Hydrolase AT1G55740 38.514 2.07e-165 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01565 - - gmx:100816978 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01565 06 15207032 15211667 Gma06g01565 06 15207032 15211667 ECH
Gma04g01844 04 48537179 48541016 Gma06g01565 06 15207032 15211667 GST