Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01562 ATGAGTAACCACACTCGCGCGCTACCACCAGCAGCTACCCCTAAGATGCAGCAAAGGAAGGAGCGACAAAGGTTCTCCACTTCTGATGACAGTGCCATGACCAAGCAAGTTCAGGCCACTCATGCCCCTGATGGTCGTGAAATTGATGTCAAACCCATTCTCCAAATTGTGGATGAAATATTGGTTCGGTTCATCGCTCGCACTGTTGAGGGTTACGAAGTAAAGCGAGATCAAGATGCATTGGAGATGACAGCTGCTCTGGCTGAATTTGACATGCTTGACTCGCTGGCTTATATCATAAACAAAATTTCGTGCGAGCTATCATGCAAGTGCTCGGGAGGTGGAGATGCACATTCCTCAACAATGGTGTTACTGAATTACATCTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACCTTAGCAGCCTTTGCCGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAACACGCTTGCCAAGTCTGTGGCCCTCCTTAAGCAACTGCCTGACATTGCTGAGAATTTCATGTCCATGAAACCTCATTTTGAAGCACTCATTAGGCTCGTGAAGGCGGCGATGGATGTAACCATGTGCATTGTTGAATTCAAGGAGCTACCATCTGAATACATCTCTGAGGATACTCCTCCTATGTCTGTTGCAAGTACTCACATTCCTATTGCTTCCTATTGGGTCATCAGAAGTATTGTGGCTTGTTCCTCACAAATTTCTAGTTTCATAGGCATGAGAAATGAGTCCATTTCATCAACCACAGAGGCATGGGAATTATCTAGTCTGGCTCACAAAGTTAGTAGTATATATGAGCACCTCAAGAACCAACTGGTTCTTTGCTACCAATATATAGATGACAAGAGGCATATAGAGGCCTTCCATAATCTGATACGTCTTTTCGAGACAGTCCATGTAGACAACATGAAAATTCTCAGAGCACTGATATATGCAAAGGATGATGTTCTTCCACTTGTAGATGGAACTGCAAAATCAAGGGTTAGTCTCGAGGTACTAAGGAGGAAACATGTGTTGCTGCTAATATCAGATCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGACAATTTGTACAAGGATGCGCGAGCAAGGGGCGACACGCAATACGAGATGGTATGGATCCCAATTGTGGACAAAGCAACCTGGAATGACATGAGCAAACAGAAGTTTGAGTATTTGCAATCATTGATGGCATGGTACAGTGTCTATGATCCTTTCATCATTGAACCATCAGCAGTTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGAAAGCTATTCTAGTGGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCTGTGCACATGATATGGATTTGGGGAAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTGCTTGTTGATGGCATTGATCCTACAGTTTTAGAATGGATGACAGAAGGCAAACTGATATGCCTGTATGGAGGAGAAGACCTGGAATGGATTGAAAAATTCACAGCCACTGCAATAAGCGTTGCAAAAGCAGGCAAGTTCGAGCTAGAGATGGCGTACGCGGGGAAGAGCAACGCGAAGGAGCGTATGCAGAAGATGATCAAGACATTCACCACAAGAAAGTTCAGCTACTTCTGGCCAAACGTGACATCGATATGGTTCTTCTGGACGAGGCTGGAGAGCATGCTGTACTCGAAGCTGCTGCACGGGAGGACGGTGGAGAAGGACGAGATCATGAGCGAAGTCATGACGGTCCTAAGCTTTGACGGCAGCGACCGAGGGTGGGCGATCTTCTGCAGAGGCGCCACCGAGATGGCCAGAGCCAAGGGTGACAGTGCTCTCAGATGCTTGCAGGATTTTGATAAGTGGAAGGGAAGAATTGAGGAAGACGGTGTGGTGCATGCAATCAATGATTATCTCAACAAAAACAAACCACCGCATCACTGCAACCGCCTGATCCTTCCCGGGAGCACTGGTGGCATACCACAGAAGGTTGTTTGTGCTGAGTGTGGACGCCAAATGGAGAAGTACTTCATGTATCGTTGTTGTGTGGAGTAA 2118 0.4594 MSNHTRALPPAATPKMQQRKERQRFSTSDDSAMTKQVQATHAPDGREIDVKPILQIVDEILVRFIARTVEGYEVKRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLNYISSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDIAENFMSMKPHFEALIRLVKAAMDVTMCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACSSQISSFIGMRNESISSTTEAWELSSLAHKVSSIYEHLKNQLVLCYQYIDDKRHIEAFHNLIRLFETVHVDNMKILRALIYAKDDVLPLVDGTAKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARARGDTQYEMVWIPIVDKATWNDMSKQKFEYLQSLMAWYSVYDPFIIEPSAVKYIKEVWNFSKKAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTEGKLICLYGGEDLEWIEKFTATAISVAKAGKFELEMAYAGKSNAKERMQKMIKTFTTRKFSYFWPNVTSIWFFWTRLESMLYSKLLHGRTVEKDEIMSEVMTVLSFDGSDRGWAIFCRGATEMARAKGDSALRCLQDFDKWKGRIEEDGVVHAINDYLNKNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01562 705 Pfam Sieve element occlusion N-terminus 28 312 IPR027942 -
Gma06g01562 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 704 - -
Gma06g01562 705 Pfam Sieve element occlusion C-terminus 474 703 IPR027944 -
Gma06g01562 705 MobiDBLite consensus disorder prediction 1 42 - -
Gma06g01562 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 704 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01562 Gma-Chr6 15184684 15190723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01562 - - gmx:100789215 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01562 06 15184684 15190723 Gma04g01847 04 48560305 48565600 ECH
Gma06g01562 06 15184684 15190723 Gma06g01562 06 15184684 15190723 ECH
Gma04g01847 04 48560305 48565600 Gma06g01562 06 15184684 15190723 GST