Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01472 ATGGATCGGAGGAGAAACGCGAGTCCGGTGTACGCGCGGCAGTGGAGCGGCGGTTCCAGCAGCACCGGTTCTTCGTCGCCGGCGATGTCGCCGGCTCATCCTCAGTCACGCCTCGGCCCTACTTCCGCCACCGGTCTCTCCACCGTCAAGCGCACGCAAAACGTGGCCGCCAAAGCCGCCGCGCAGCGACTTGCTCGCGTCATGGCGTCTCAGACCACCACCGCCGATGACGGCGAGGACGACGACGATCTCGATTTCCGGTTCAGCGCTCCGCCTCCTGCCTCTCTTTCTTCCTTCTCCAGCAACTCCGGCAGTAACCGGAGTGCCAGCGCTAATGCCACCGCCATTCCTCCGATTTCGGTCGCCAGGCCTAACAGATCTCCTTCTCCTGCGTTAGGTCGGAACTTTGTAGAGCATACTCATTCGGTTCGTTCAACATCAGCCGGAAGACCGGCAGTTTCAGTTCGCTCGGCGGCAGTGGTGGCTCCGAACAAATCCACACTCCGAACGCCTATGGCTATACCTCCTATTGACCCTCCTACCAATCGGAATAGAGACAAAAGGTTTACATCAGATATATCCATCAGACCACTTAACTCAAAAGACACAGGAGATCAGCGTGAAGCTTCTGCACTCCGTGATGAACTCGATATGCTACAAGAAGAGAATGAGGTTTTATTAGAAAAGCtaagacaagcagaggaaaaacgccaagaagtggaggccagaacaagggaacttgagaaacagGTTGCTTCTCTTGGAGAAGGTGTATCCCTCGAAGCTAAACTGCTGAGCAGGAAGGAAGCTGCTCTGCGTCAAAGAGAGGCTGCTCTCAAGGCTGCTCAACAAACACAGAGTGGGAGAGATGAGGATATTGCAGCCCTTCGAGTGGAAATTCAGAACCTAAAAGATGACGCTACAGCAGCTTTGGAACAACAGCAAGAAGCTGAAGCTGAAGCAAAGGCCCTTCGCACAATGACACAGAGAATGATTTTGACCCAAGAAGAAATGGAGGAAGTTGTCCTGAAGAGATGTTGGCTTGCCCGCTACTGGGGTCTTGCTGTAAAACATGGCATATGTGCAGATATAGCACAATCCAAGCATGAACATTGGTCTTCTCTAGCTCCTCTTCCTTTTGAACTTGTCATCTCTGCTGGACAGAAGGCTAAGGAGGAATCTTGGAACAAAAAGCATGGACCAGGTGCTGATGGTCCAGATAGAAGCAAACTTGTTCGTGATTTGAATGATCTTGCTGGGGAAGGAAATATTGAGAGTATGCTCTCAGTTGAGATGGGTTTGAGGGAACTTGCCAACTTAAAGGTTGAGGATGCTGTTGTGCTCGCATTAGCCCAACACAGACGACCAAATTCAGTTCGGCAGTCTGTTTTAGATTCCAAATCACATGGTGATGCCAAATATTCAGAAGCATTTGAATTAAGTGAAGAGGAAGCAGAAGATGTTCTTTTCAAAGAGGCATGGTTAACTTATTTCTGGAGAAGAGCTTTATTTCATTGCGTGGAAGAAGATATTGCAGAAGAGCGTCTTCAGTTTTGGATTGCCCGCAGTGGGCAGTCACCAAGTTCACATGATGCTGTTGATGTTGAGCGAGGCTTGTTGGAGTTGAGGAAGCTGAGTATAGAACAACAACTTTGGGAAGCATCACGGAAGGGAATTGATCAGCTTCAAGGGTCAGCAAATGCTAATCATAAGCATGCCACTGACTCTGATGCCTCATCCTGA 1743 0.4819 MDRRRNASPVYARQWSGGSSSTGSSSPAMSPAHPQSRLGPTSATGLSTVKRTQNVAAKAAAQRLARVMASQTTTADDGEDDDDLDFRFSAPPPASLSSFSSNSGSNRSASANATAIPPISVARPNRSPSPALGRNFVEHTHSVRSTSAGRPAVSVRSAAVVAPNKSTLRTPMAIPPIDPPTNRNRDKRFTSDISIRPLNSKDTGDQREASALRDELDMLQEENEVLLEKLRQAEEKRQEVEARTRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAQQTQSGRDEDIAALRVEIQNLKDDATAALEQQQEAEAEAKALRTMTQRMILTQEEMEEVVLKRCWLARYWGLAVKHGICADIAQSKHEHWSSLAPLPFELVISAGQKAKEESWNKKHGPGADGPDRSKLVRDLNDLAGEGNIESMLSVEMGLRELANLKVEDAVVLALAQHRRPNSVRQSVLDSKSHGDAKYSEAFELSEEEAEDVLFKEAWLTYFWRRALFHCVEEDIAEERLQFWIARSGQSPSSHDAVDVERGLLELRKLSIEQQLWEASRKGIDQLQGSANANHKHATDSDASS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01472 580 Coils Coil 293 327 - -
Gma06g01472 580 MobiDBLite consensus disorder prediction 164 207 - -
Gma06g01472 580 MobiDBLite consensus disorder prediction 12 55 - -
Gma06g01472 580 MobiDBLite consensus disorder prediction 391 410 - -
Gma06g01472 580 Coils Coil 265 285 - -
Gma06g01472 580 Coils Coil 209 250 - -
Gma06g01472 580 MobiDBLite consensus disorder prediction 93 115 - -
Gma06g01472 580 MobiDBLite consensus disorder prediction 68 134 - -
Gma06g01472 580 MobiDBLite consensus disorder prediction 1 55 - -
Gma06g01472 580 PANTHER MYOSIN 1 561 - -
Gma06g01472 580 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 561 IPR040321 GO:0000911
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01472 Gma-Chr6 14079076 14089715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01472 1 556 EF-hand Containing Proteins AT5G13260 56.838 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01472 - - gmx:100805810 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01472 06 14079076 14089715 Gma06g01472 06 14079076 14089715 ECH