Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01402 ATGAAGTCATGGAAGTTGGGATTTTTGGTTCTGCTAGTTTTGTTCAGCACCTCTACTTGTTCTGCTTGGTTTGGTAGTAAACACAAAAGTTCCAGTGGAAGGAGCTCCTTTCATCCAGATGAGGCTTCATCGTCGTCCTCGTCGTCGTCACCATACATACTAAACCGTTTTCGTGCTGGCTCATCCGTCGTGTTCCCGGTTCACGGCAATGTTTACCCAGTTGGGTTTTATAATGTTACTCTCAACATCGGCCAACCACCCAGGCCATATTTTCTAGATATTGACACGGGTAGCGACCTCACCTGGCTTCAATGTGATGCCCCTTGTTCCCGTTGCTCTCAGACACCACATCCACTATACAGACCAAGCAATGACTTTGTGCCCTGCAGGCATTCCCTCTGTGCATCCTTGCACCACAGTGATAACTACGACTGTGAAGTCCCACATCAGTGTGACTACGAAGTTCAGTATGCAGATCATTACTCATCCCTCGGTGTACTTCTCCATGATGTCTACACCCTCAACTTTACAAACGGAGTCCAACTCAAAGTTCGTATGGCACTTGGATGTGGATATGATCAGATTTTTCCAGATCCTTCTCACCACCCACTAGATGGAATGCTTGGCCTTGGCAGGGGAAAAACCAGCTTGACATCACAGCTGAATAGTCAGGGTTTGGTGCGAAATGTGATTGGGCACTGCTTGAGTGCACAAGGAGGAGGGTATATCTTCTTTGGAGATGTTTATGATTCTTCTAGACTAACTTGGACTCCAATGTCATCCAGAGATTACAAACATTACTCAGCAGCTGGGGCAGCTGAGCTTCTTTTTGGAGGGAAGAAGAGTGGGATTGGAAGTCTTCATGCTGTTTTTGACACTGGGAGTTCTTACACCTATTTCAACCCATATGCTTACCAAGCACTAATTTCTTGGTTGGGGAAGGAATCAGGTGGAAAACCCCTAAAAGAAGCACATGATGATCAAACTCTCCCTCTCTGTTGGCGTGGTAGAAGACCTTTCAGAAGCATATATGAAGTAAGAAAATACTTCAAGCCAATCGTGCTTAGTTTCACCAGCAATGGGAGAAGTAAAGCTCAATTTGAAATGCCTCCTGAAGCATATCTGATAATATCAAACATGGGAAATGTTTGCTTGGGCATTCTAAACGGCTCTGAAGTAGGGATGGGGGATCTGAACCTAATTGGAGACATATCCATGCTAAACAAAGTAATGGTATTTGACAACGACAAGCAGTTGATTGGTTGGACACCAGCAGATTGTGACCAGGTTCCAAAATCAAGAGATGTAAGCATTTGA 1317 0.4487 MKSWKLGFLVLLVLFSTSTCSAWFGSKHKSSSGRSSFHPDEASSSSSSSSPYILNRFRAGSSVVFPVHGNVYPVGFYNVTLNIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDFVPCRHSLCASLHHSDNYDCEVPHQCDYEVQYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGCGYDQIFPDPSHHPLDGMLGLGRGKTSLTSQLNSQGLVRNVIGHCLSAQGGGYIFFGDVYDSSRLTWTPMSSRDYKHYSAAGAAELLFGGKKSGIGSLHAVFDTGSSYTYFNPYAYQALISWLGKESGGKPLKEAHDDQTLPLCWRGRRPFRSIYEVRKYFKPIVLSFTSNGRSKAQFEMPPEAYLIISNMGNVCLGILNGSEVGMGDLNLIGDISMLNKVMVFDNDKQLIGWTPADCDQVPKSRDVSI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01402 438 Pfam Xylanase inhibitor C-terminal 286 423 IPR032799 -
Gma06g01402 438 PANTHER ASPARTYL PROTEASES 9 432 IPR001461 GO:0004190|GO:0006508
Gma06g01402 438 SUPERFAMILY Acid proteases 69 430 IPR021109 -
Gma06g01402 438 MobiDBLite consensus disorder prediction 28 50 - -
Gma06g01402 438 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 9 432 - -
Gma06g01402 438 Pfam Xylanase inhibitor N-terminal 77 247 IPR032861 -
Gma06g01402 438 ProSiteProfiles Peptidase family A1 domain profile. 77 423 IPR033121 -
Gma06g01402 438 Gene3D Acid Proteases 55 246 IPR021109 -
Gma06g01402 438 Gene3D Acid Proteases 247 431 IPR021109 -
Gma06g01402 438 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Gma06g01402 438 PRINTS Pepsin (A1) aspartic protease family signature 289 300 IPR001461 GO:0004190|GO:0006508
Gma06g01402 438 PRINTS Pepsin (A1) aspartic protease family signature 399 414 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01402 Gma-Chr6 13274384 13277946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01402 61 433 Miscellaneous Gene Families AT1G44130 52.116 8.85e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01402 - - gmx:100819172 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01402 06 13274384 13277946 Gma06g01402 06 13274384 13277946 ECH