Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01379 ATGTCTCCTCCCCTAATGGAATTAAGTGCTTCCACTCTAGTACTTTACCCTGCATCACAGCCACCACAAGAGCCTAAAAATGAGAACAATGGGGGCATAGTTTTTGACTCAAAAAATTTGCAGCAAATGCAAGGGGAAATGCCCAAAGAGTTCCTTTGGCCTTCTAGGGACTTGGTTGACACCACCCAAGAGGAGCTAAAGGAACCCCTTGTGGACCTAGCAATCTTTAAGAATGGTGACGAGAAAGCTATTTCCAATGCAGCAGAGCTTGTGAGAAAAGCATGCTTGAAGCATGGGTTTTTCCAAGTGATAAACCATGGTGTGGACCCAGATCTCATTGATGCTGCATATCATGAAATTGACTCCATTTTTAAGCTCCCATTGAGCAAAAAGATGGGTGCTAAGAGAAAACCTGGTGGTGTCTCAGGGTACTCTGGTGCTCATGCAGATCGTTATTCGTCCAAGTTGCCATGGAAAGAGACGTTTTCTTTCCTCTATGATCACCAAAGCTTCTCCAACTCCCAGATTGTTGACTACTTCAAGTCTGTGTTAGGGGAGGATCTTCAACACACAGGGAGGGTATATCAAAAGTACTGCGAGGCAATGAAGGATTTATCTTTAGTAATTATGGAGCTATTGGGTATTAGTTTGGGTGTGGATCGTGAGCATTATCGAAGATTTTTTCAAGATGGTGACTCAATAATGAGGTGCAACTATTATCCACCTTGCAACAGAGCGAACCTCACCTTAGGCACTGGCCCTCACACTGATCCAACCTCACTAACCATTCTTCATCAAGACCAAGTTGGAGGTTTAGAAGTTTTTGTAGATAACAAATGGCTCGCTGTTCGCCCTCGATCTGAAGCCTTAGTCATAAACATAGGTGATACTTTCATGGCATTGTCAAATGGGAGATACAAGAGTTGTCTACACAGGGCATTGGTGAACACATACAGGGAGAGAAGGTCCCTTGTTTATTTTGTGTGTCCAAGAGAAGACAAAATAGTGAGGCCCCCAGACAATTTGTTATGCAGAAATGAGGAAAGGAAGTACCCTGATTTCACATGGTCCAATTTGTTTGAATTCACACAGAAGCACTATAGGGCTGATGTTGCTACCCTCCAAAGCTTCATTGAGTGGCAGCAATGCTCTAATTCCAACCCTTCCAACTTCTAG 1176 0.4354 MSPPLMELSASTLVLYPASQPPQEPKNENNGGIVFDSKNLQQMQGEMPKEFLWPSRDLVDTTQEELKEPLVDLAIFKNGDEKAISNAAELVRKACLKHGFFQVINHGVDPDLIDAAYHEIDSIFKLPLSKKMGAKRKPGGVSGYSGAHADRYSSKLPWKETFSFLYDHQSFSNSQIVDYFKSVLGEDLQHTGRVYQKYCEAMKDLSLVIMELLGISLGVDREHYRRFFQDGDSIMRCNYYPPCNRANLTLGTGPHTDPTSLTILHQDQVGGLEVFVDNKWLAVRPRSEALVINIGDTFMALSNGRYKSCLHRALVNTYRERRSLVYFVCPREDKIVRPPDNLLCRNEERKYPDFTWSNLFEFTQKHYRADVATLQSFIEWQQCSNSNPSNF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01379 391 Gene3D - 38 368 IPR027443 -
Gma06g01379 391 PRINTS Isopenicillin N synthase signature 91 108 - -
Gma06g01379 391 PRINTS Isopenicillin N synthase signature 255 276 - -
Gma06g01379 391 PRINTS Isopenicillin N synthase signature 290 316 - -
Gma06g01379 391 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 230 330 IPR005123 -
Gma06g01379 391 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 29 384 - -
Gma06g01379 391 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 29 384 - -
Gma06g01379 391 Pfam non-haem dioxygenase in morphine synthesis N-terminal 69 169 IPR026992 -
Gma06g01379 391 Pfam 2OG-Fe(II) oxygenase superfamily 232 330 IPR044861 -
Gma06g01379 391 SUPERFAMILY Clavaminate synthase-like 44 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01379 Gma-Chr6 12969318 12974138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01379 46 368 Glycosyltransferase AT5G59530 29.326 1.56e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01379 K05282 - gmx:100816834 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01379 06 12969318 12974138 Gma06g01379 06 12969318 12974138 ECH
Gma04g02037 04 50822918 50827306 Gma06g01379 06 12969318 12974138 GST