Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01378 ATGGCTTTGGGGAAATATGCTAGGGTAGATGGTAGAAGATCGTCGAGCTGGTGTTCGACGGTGACTGTTGTCGTGTTTGTGGCTCTATGCTTGGTTGGGGTTTGGATGATGACATCATCTTCAGTTGTCCCTGTGCGTAATGGAGATGAGGCCCAGGAGAATAAGAACCAAGTGAAAGAACAAACAGAGCCTACAGAGGTGAAAGAAGCAGTGAGTGAGGTCAGCAATAGCAATATGCGGCAGTTTGAAGATAATCCAGGTGATTTGCCTGAGGATGCAACCAAAGGGGACAGCAATGTAGCCTCTGAAGACAACTCAAACTTGTCAGATAAACAAGAAGAGAAGTCGGAGGAAAATCCTGTAGAGAGGTCTTCTGACGATACAAAGTCGGAAGACGTGGAGGATAAGAAAACTGAGGAGGAAGGTTCTAATACAGAAAATGAATCAAACTCAGACTCTACAGAAAATAGCAAAGACAGTGATGAGACTTCCACTAAAGAATCTGATTCTGATGAGAATGAGAAGAAGTCTGATTCAGATGAAAGTGAAAAGCAATCTAATGACACTGATGAAACAACAGATACTAAGATAGAGGAGAAGGTGGAAGAAAGTGATAACAAGGAATCTGATGAAAACTCTAGTGAGAAGAATATAAATGATGATACCAAACAGAAGAGTTCAAAGGAGGTATACCCTTCTGGGGCTCAGTCTGAGCTTCAAGAAGAAAGTACAGCAGAAACTGGGTCTTGGTCAACTCAGGCAGCACAGTCGAAGAATGAAAAGGATTCTCAAGAGTCCTCCAAGCAGCCAACTGGATACAAGTGGAAGCTTTGTAATGTCACTGCTGGTCCTGATTTTATACCATGCCTTGATAACTGGAAAGCTATTAGGAGTCTCCAGAGTACTAAACACTATGAACATCGAGAAAGGCACTGTCCTGAAGAACCTCCTACCTGCCTTGTTCCTGTTCCTGAAGGTTATAAACGCCCAATTGAGTGGCCTAAGAGCAGAGAGAAGATATGGTATTACAATGTTCCACACACCAAGCTTGCTGAAGTTAAGGGCCACCAGAATTGGGTGAAAGTAACGGGCGAGTACCTTACTTTTCCTGGTGGTGGAACCCAATTCAAACATGGGGCACTTCATTACATTGACTTTATACAAGAGACTGTACCTGACATTGCTTGGGGAAAACGCACACGTGTTATACTAGATGTTGGATGTGGTGTTGCCAGCTTTGGAGGTTTTCTCTTTGATAGAGATGTACTTGCAATGTCGTTAGCACCAAAGGATGAACATGAAGCTCAGGTACAATTTGCACTTGAAAGGGGGATTCCTGCTATATCTGCTGTGATGGGCACAAAGAGGCTTCCCTTCCCTGGGAAAGTATTTGATGTAGTCCATTGTGCACGATGTAGAGTTCCGTGGCATATAGAAGGTGGTAAACTTCTTTTGGAGCTAAATAGAGTATTGAGACCTGGAGGTTTTTTTGTATGGTCTGCTACTCCAATTTATCAGAAGCTTCCTGAAGATGTTGAAATATGGAAGGCCATGAAGGCACTAACAAAAGCCATGTGCTGGGAAGTTGTGTCGATCAGCAAGGATCCAGTAAATGGAGTAGGTGTAGCTGTATACAGGAAGCCAACTTCTAATGAGTGTTACGAGCAACGCTCAAAGAATGAGCCACCGCTGTGTCCAGACTCTGATGATCCTAATGCAGCATGGAACATTCAATTGCAAGCTTGCTTGCACAAAGCGCCAGTTAGTTCAAAGGAACGAGGCTCAAAATTGCCTGAGCTGTGGCCAGCCAGACTGATCAAAGTGCCTTATTGGTTGTCGAGTTCCCAAGTTGGAGTTTATGGAAAGCCAGCCCCTCAAGATTTCACTGCTGATTATGAACACTGGAAACGTGTAGTATCCAAGTCTTATCTAGACGGGATGGGAATTAAATGGTCAAATGTACGCAATGTCATGGATATGAGATCTATCTATGGAGGATTTGCTGCAGCTTTGAGAGATTTGAATGTTTGGGTCATGAATGTGGTTACAATAGACTCCCCAGATACTCTTCCTATTATTTATGAACGAGGTCTTTTTGGTATATATCATGATTGGTGTGAATCATTTAGCACCTATCCTAGGACCTATGATCTCCTCCATGCTGATCATTTGTTTTCAAAGCTTAAGAAAAGGTGCAATTTGGCTGCTGTAGTGGCTGAGGCTGATCGGATTCTTAGGCCTGAAGGAAAACTTATTGTTCGCGATACTGTTGAGATCATTGAAGAGCTTGAGAGCATGGCTAGGTCTATGCAGTGGAAGGTGAATCGGATCAGATATGCGTCTAAATTGGCGCAAACTACAGGGCATCTCTCGTGTGCGCGCTGGTTGTTCCCTGGCTCTCTATCCCCTGGACCTACAAGCTTTACGACTTCGATAGCAATAGCAAGACAGCTTGAAACTCGCAGGAATTTTGGAGAGAACATCAAATTTATTAAGGAAATTCTATAA 2508 0.4342 MALGKYARVDGRRSSSWCSTVTVVVFVALCLVGVWMMTSSSVVPVRNGDEAQENKNQVKEQTEPTEVKEAVSEVSNSNMRQFEDNPGDLPEDATKGDSNVASEDNSNLSDKQEEKSEENPVERSSDDTKSEDVEDKKTEEEGSNTENESNSDSTENSKDSDETSTKESDSDENEKKSDSDESEKQSNDTDETTDTKIEEKVEESDNKESDENSSEKNINDDTKQKSSKEVYPSGAQSELQEESTAETGSWSTQAAQSKNEKDSQESSKQPTGYKWKLCNVTAGPDFIPCLDNWKAIRSLQSTKHYEHRERHCPEEPPTCLVPVPEGYKRPIEWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETVPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGKVFDVVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWKAMKALTKAMCWEVVSISKDPVNGVGVAVYRKPTSNECYEQRSKNEPPLCPDSDDPNAAWNIQLQACLHKAPVSSKERGSKLPELWPARLIKVPYWLSSSQVGVYGKPAPQDFTADYEHWKRVVSKSYLDGMGIKWSNVRNVMDMRSIYGGFAAALRDLNVWVMNVVTIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKLKKRCNLAAVVAEADRILRPEGKLIVRDTVEIIEELESMARSMQWKVNRIRYASKLAQTTGHLSCARWLFPGSLSPGPTSFTTSIAIARQLETRRNFGENIKFIKEIL 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01378 835 MobiDBLite consensus disorder prediction 152 227 - -
Gma06g01378 835 CDD AdoMet_MTases 403 498 - -
Gma06g01378 835 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 68 IPR004159 GO:0008168
Gma06g01378 835 MobiDBLite consensus disorder prediction 228 260 - -
Gma06g01378 835 MobiDBLite consensus disorder prediction 47 270 - -
Gma06g01378 835 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 187 781 IPR004159 GO:0008168
Gma06g01378 835 Gene3D Vaccinia Virus protein VP39 375 580 IPR029063 -
Gma06g01378 835 MobiDBLite consensus disorder prediction 52 67 - -
Gma06g01378 835 MobiDBLite consensus disorder prediction 68 83 - -
Gma06g01378 835 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 650 781 IPR029063 -
Gma06g01378 835 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 285 788 IPR004159 GO:0008168
Gma06g01378 835 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 308 562 IPR029063 -
Gma06g01378 835 MobiDBLite consensus disorder prediction 107 144 - -
Gma06g01378 835 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 187 781 - -
Gma06g01378 835 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 5 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01378 Gma-Chr6 12952310 12960043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01378 - - gmx:100816312 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01378 06 12952310 12960043 Gma06g01378 06 12952310 12960043 ECH
Gma04g02038 04 50836546 50841691 Gma06g01378 06 12952310 12960043 GST