Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01342 ATGGCACAGTGTACGGCAAGAACGTTGGAGAAACTAAATCCGATTAATTATAACGACGCGACGCAACGCCGGCGATGGGAGCGTCCTCTTCGTCGGAGCCGAGTTTCGGCGGAACAGAAGGAGTCGGAGGCCGTCGCAGCCTCCACCGGAGCTCTTCCACTGCTTCAGAAAGCATTCTCTAAGCTCGCCAATCCCGAGACCAACGCCGTTTCCTTAGAAAATATCCAGCAATGCTTCAGTTTCGGTCGCGAAGGTCGTACTTTTTCCGGAAGCAACGTGCCGGATTCGTTTCCGGTGTTACTAGATCACTTAGCATCATCCCTAGTTGATCAATTTTTCGTGCCTAACAAAGAAGGAATAAATTGGATTGAATTCGTGAGGGATTACAACAAGTGCTGTGCTAGGGTGTCCGCGTCGGGTTCGCTGAACATGCTCGTGAGAGTGTTCGTCGCTATCTCACAAAGTGCGAACCTGCCTTTGCATTTGGAGTTTGAATCAGGGGATGATGATTGCAAGATCAACGGGAACCTTCTTCCTAGCCACGTGTTTCTGCTTCTTGCCCTGTGTTGGGTTGATGGTGGTTTGAATGTGTGGGACTGTGATATCTCGAGTTTCGAAGTTCAGCTTCCTGCAGTGAAGTTTGTTACATGGGTTATGAGTACTGTGCCGTGCCTCCCGGATTGCTTGAGACAGTATTTTCATGCTAGACTTCAAATGGCAGCATCTGATGGGGTTGAATTGCCATCCTCTAATTCCTCCTCTGGTGGAGATATTTCATCAACAGCTGCATATGATTATATTTTGACCCAAGGAAGAGCATGGGCAATTTCTATAACACAGAAAAGTACAGTAAAGGAAGAGATTTCTAGAGCATTTATAAGCAATGGAGGTGGAATGGATGATAACCTTCTTTATCGGTCATCCACTCATGGAAGAGGCCTTGGCAGATTTTGGTCTCATGTTGAAGGTTACAGAGGTCCTTTGTTAATTTTGATAGCTGCAAGTTCAGGAGATGCCCATGAGGGAAATTCCATTGATAGGAAATGGGTTGTAGGTGCCTTAACAGATCAAGGTCTTGAAAATAAAGATATCTTCTATGGAAACTCTGGATGTTTATATTCTATTGGCCCAGTGTTTCATGTGTTTCCACCTACTGGTAAGGAAAAGAATTTTGTTTATAGCCACTTGCATCCTACTGGTAAAGTATATCAACCACATCCAAAGCCGGTTGGAGTTGCATTTGGAGGAACTCCGGGAAATGAGAATATTTATAGACGAAGATTTTGCAAAAGTGAATGTTCGCCATCACGCTATTGA 1317 0.451 MAQCTARTLEKLNPINYNDATQRRRWERPLRRSRVSAEQKESEAVAASTGALPLLQKAFSKLANPETNAVSLENIQQCFSFGREGRTFSGSNVPDSFPVLLDHLASSLVDQFFVPNKEGINWIEFVRDYNKCCARVSASGSLNMLVRVFVAISQSANLPLHLEFESGDDDCKINGNLLPSHVFLLLALCWVDGGLNVWDCDISSFEVQLPAVKFVTWVMSTVPCLPDCLRQYFHARLQMAASDGVELPSSNSSSGGDISSTAAYDYILTQGRAWAISITQKSTVKEEISRAFISNGGGMDDNLLYRSSTHGRGLGRFWSHVEGYRGPLLILIAASSGDAHEGNSIDRKWVVGALTDQGLENKDIFYGNSGCLYSIGPVFHVFPPTGKEKNFVYSHLHPTGKVYQPHPKPVGVAFGGTPGNENIYRRRFCKSECSPSRY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01342 438 Pfam TLD 303 418 IPR006571 -
Gma06g01342 438 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 193 424 - -
Gma06g01342 438 SMART 109ultra 281 434 IPR006571 -
Gma06g01342 438 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 34 191 - -
Gma06g01342 438 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 193 424 - -
Gma06g01342 438 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 34 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01342 Gma-Chr6 12621838 12624943 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01342 - - gmx:100786867 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02073 04 51213674 51218309 Gma06g01342 06 12621838 12624943 GST