Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01315 ATGGCTTCGACTTCAATCACTACCTTGTCCATCTACTCTCACTCCCAACCAAAGTTCCTCAATCTGCTTCAACACCCCCTCATTCACACCCGCAACAAAAGCACATCAATTACGTTTAAGCCAGCGATAGTTCGCGCCACCCTTTTCTCTACACTCACTTGTTCTCACACCCCTTCCACACCCTCTTCAAATTTACCACCGGGAAGGGCTTTAACCAAGTTCCTCTCAGAAAAGGTAGCATTTTTCCTCATTGGGTCGTTTCTCTTATCGGGTTGCTTCAGCAAAAGGCCTGCATTCGCAGAAACAGCTCCTTCCGTGGGTTCTGGAGCAGTGTTGGAGGAGAAAATGAATCCCACTgaagagaaaaacgaggaagagaaaagtgaggaagagGTGGAGGAAATGTGGGAGGGCATTTTGGAGAAGGATCCGAAAAACGTTGAGGCTCTGAAGGTGGTTTTGTATGGGAAGATTAGGAGAGGGAAATCGAAGGAGGCTGTGAAGGTTGTGGAGGATTTGATTGCTGCGGAGCCGAATGAGGTGGAGTGGAGGCTCTTGCTTGCACTTTGTTATGAGACTATGGGGCAGTTGAGTAAGGCTAAAAGATTGTTCAGGGAAATCTTGAAGAAGAGGCCTCTTCTAGTCAGAGCTCTTCATGGTTTGGCTATGGCAATGCACAAAATCCATGAAGGTCCTGCTGTATTTGAAATGCTAAATAATGCTCAAGAGTTAGCTTCTCGCGAAAACAGAGTTACCGAGGAGAGAAATATAAGAATCTTAATTGCGCAAATGCATGTTGTCCAGGGTAATTTGGAGGAGGGCTTGAAAAGATTTCAAGAATTGATTGATCAAAATCGTCGAGATTTTAGGCCTTATATTTGCCAGGGAATAATATACAGTCTCCTGGGTAAAAATGAGGAAGCGGCACAGCAGTTTGAAACATATCAAACTCTTGTGCCTGAAGAATTTCCTCAGAGACGATTCCTCGATGATGTTGCCATAGCAGCAAAAAGATCATCCCTGGAACAGTTTAAGAAGGAATTCAGAGATCAATTTTCTTATCGGAAATAG 1071 0.4295 MASTSITTLSIYSHSQPKFLNLLQHPLIHTRNKSTSITFKPAIVRATLFSTLTCSHTPSTPSSNLPPGRALTKFLSEKVAFFLIGSFLLSGCFSKRPAFAETAPSVGSGAVLEEKMNPTEEKNEEEKSEEEVEEMWEGILEKDPKNVEALKVVLYGKIRRGKSKEAVKVVEDLIAAEPNEVEWRLLLALCYETMGQLSKAKRLFREILKKRPLLVRALHGLAMAMHKIHEGPAVFEMLNNAQELASRENRVTEERNIRILIAQMHVVQGNLEEGLKRFQELIDQNRRDFRPYICQGIIYSLLGKNEEAAQQFETYQTLVPEEFPQRRFLDDVAIAAKRSSLEQFKKEFRDQFSYRK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01315 356 Pfam Tetratricopeptide repeat 159 218 - -
Gma06g01315 356 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 347 - -
Gma06g01315 356 PANTHER OS05G0182100 PROTEIN 1 347 - -
Gma06g01315 356 SMART tpr_5 181 214 IPR019734 GO:0005515
Gma06g01315 356 SMART tpr_5 255 288 IPR019734 GO:0005515
Gma06g01315 356 SMART tpr_5 289 322 IPR019734 GO:0005515
Gma06g01315 356 Gene3D Tetratricopeptide repeat domain 111 338 IPR011990 GO:0005515
Gma06g01315 356 SUPERFAMILY TPR-like 130 321 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01315 Gma-Chr6 12329893 12333960 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01315 - - gmx:100798720 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02099 04 51485143 51489597 Gma06g01315 06 12329893 12333960 GST