Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01061 ATGGAGAGGGCAGAACAAATTGGAGGAGGCAAAGCTGTGGCCACAGTCCTAGCCATTGGCACAGCAAATCCACCCAATTTCATCCTTCAGGAGGATTATCCTGACTTCTACTTTCGGGTCACCAATAGCGACCATTTGCACCGCTTGAAGCAAAAGTTCAAGCGCATTTGCGAGAATTCAAAGATAGAAAAGCGACACATAGTCCACACGGAAGAATACCTAAAGCAGAACTCAGACAGCGGCACGTACGATGGCCTTCCCTTGGAGACACGACAGAATGTCCCCACGGAACAGGTAATAAAATTAGGTATGGAAGCAGCATCAAAGGCCATTAAGGAATGGGGCGAACCCTTATCAGAAATCACACACCTCATCTTCTACACCACTTCTTGCTTCGGCTCCGTTCCCGGTCCTGACCACTACCTCTCCAAACAACTTGGACTCCGCTCAACGGTCAACCGCCTCATGCTCTTCAGCCACGGTTGCCACGCTGGCGGCACCATTCTCCGCGTTGCCAAAGATATCGCGGAGAACAACCCTGGCTCACGTGTTCTTGCCGTCTGTTCCGAGACCATGTTTGCCTCGTTTCGCGCTCCTAGCGAATCCAACGTTGAGGTTCTCGTAGGACAGGCTCTGTTCGGAGACGGTGCCGCCGCCGTCATCATTGGCGCGGATCCTAAGCACTCCATCGAGCATCCACTCTTCGAACTCGTGTTGGCTTCTCAAACCACTGTGCCTGACACCGAGAATGCGATCAAAGGAAGTCAACAAGAGAATAGGTTGGTTTATTATTTGGATAAGGACATTCCCAATATTGTAACTAACAATGTGAAGAAGTGTTTGGTTGATGAGTTGGGTGAAGTTGGTTTCGTCGACGAAATTGATTGGAACAAGTTTTTCTATGCAATTCATCCGGGTGGGGCTGTTATTGTGAGTGGGGTTGAAGAGAAGCTAGGGTTAGAGAAAGAGAAGCTGAGTGCGACATGGCACGTGCTGAGCCAACACGGGAACATGTGGAGTCCAACTGTGATTTTTATCTTGGATGAGATGAGGAACAGGTCCAAGACTGAGGGGAAGAGCACAACCGGTGAAGGGTTAGAGTGGGGGATTTTATTAGGGTTTGGTCCTGGTGTGGCAATGGAAACTGTGCTTTTACGTAGTTATCCATGTTGA 1173 0.4945 MERAEQIGGGKAVATVLAIGTANPPNFILQEDYPDFYFRVTNSDHLHRLKQKFKRICENSKIEKRHIVHTEEYLKQNSDSGTYDGLPLETRQNVPTEQVIKLGMEAASKAIKEWGEPLSEITHLIFYTTSCFGSVPGPDHYLSKQLGLRSTVNRLMLFSHGCHAGGTILRVAKDIAENNPGSRVLAVCSETMFASFRAPSESNVEVLVGQALFGDGAAAVIIGADPKHSIEHPLFELVLASQTTVPDTENAIKGSQQENRLVYYLDKDIPNIVTNNVKKCLVDELGEVGFVDEIDWNKFFYAIHPGGAVIVSGVEEKLGLEKEKLSATWHVLSQHGNMWSPTVIFILDEMRNRSKTEGKSTTGEGLEWGILLGFGPGVAMETVLLRSYPC 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01061 390 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 10 390 IPR011141 GO:0009058|GO:0016747
Gma06g01061 390 PIRSF PKS_III 1 390 IPR011141 GO:0009058|GO:0016747
Gma06g01061 390 Gene3D - 234 388 IPR016039 GO:0016746
Gma06g01061 390 PANTHER CHALCONE AND STILBENE SYNTHASE FAMILY PROTEIN 10 390 - -
Gma06g01061 390 CDD CHS_like 13 385 - -
Gma06g01061 390 SUPERFAMILY Thiolase-like 233 387 IPR016039 GO:0016746
Gma06g01061 390 SUPERFAMILY Thiolase-like 14 231 IPR016039 GO:0016746
Gma06g01061 390 Pfam Chalcone and stilbene synthases, N-terminal domain 11 226 IPR001099 -
Gma06g01061 390 Pfam Chalcone and stilbene synthases, C-terminal domain 236 388 IPR012328 -
Gma06g01061 390 Gene3D - 1 233 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01061 Gma-Chr6 9931832 9934698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01061 93 375 Miscellaneous Gene Families AT4G34520 23.292 1.97e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01061 K00660 - gmx:100794652 778.474