Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01048 ATGGCAGTTCCAGTGATTGATTTTTCAAAGCTGAATGGTGAAGAAAGAACCAAAACTATGGCACAGATTGCTAATGGGTGTGAAGAGTGGGGATTTTTTCAGTTGATCAACCATGGTATTCCAGAGGAACTCCTTGAGAGGGTGAAGAAGGTTGCCTCTGAGTTCTATAAGCTGGAAAGAGAGGAGAATTTCAAGAACTCCACATCAGTGAAGCTACTAAGCGATTCAGTCGAAAAGAAGAGCAGCGAAATGGAGCATGTGGATTGGGAGGATGTTATCACTCTCCTTGATGATAATGAATGGCCAGAAAAAACACCAGGATTCAGGGAAACCATGGCAGAATATCGAGCCGAGTTAAAGAAATTGGCAGAGAAACTGATGGAGGTGATGGATGAGAATCTTGGCTTAACAAAAGGATACATCAAGAAGGCACTGAATGGTGGAGATGGAGAAAATGCCTTCTTTGGCACCAAGGTGAGCCACTACCCTCCATGTCCCCATCCAGAGCTCGTGAAGGGTCTGCGAGCTCACACCGATGCAGGAGGCGTAATCCTACTCTTCCAAGATGACAAGGTTGGTGGCCTTCAGATGCTGAAAGAAGGGCAATGGATTGATGTGCAGCCTTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAGGTCTTGAGCAATGGTAGATACAAGAGTTGCTGGCACAGGGTTCTGGCCACACCAGATGGGAACAGAAGATCAATTGCCTCCTTCTATAATCCTTCATTCAAGGCCACCATATGTCCTGCACCACAACTTGTGGAGAAAGAAGACCAACAAGTAGATGAAACTTATCCTAAGTTTGTTTTTGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTTCCCAAGGAACCAAGATTCCAAGCTGTTAGGGCCATGTGA 924 0.4545 MAVPVIDFSKLNGEERTKTMAQIANGCEEWGFFQLINHGIPEELLERVKKVASEFYKLEREENFKNSTSVKLLSDSVEKKSSEMEHVDWEDVITLLDDNEWPEKTPGFRETMAEYRAELKKLAEKLMEVMDENLGLTKGYIKKALNGGDGENAFFGTKVSHYPPCPHPELVKGLRAHTDAGGVILLFQDDKVGGLQMLKEGQWIDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLATPDGNRRSIASFYNPSFKATICPAPQLVEKEDQQVDETYPKFVFGDYMSVYAEQKFLPKEPRFQAVRAM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01048 307 Pfam 2OG-Fe(II) oxygenase superfamily 160 253 IPR044861 -
Gma06g01048 307 Coils Coil 112 132 - -
Gma06g01048 307 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 305 - -
Gma06g01048 307 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 99 IPR026992 -
Gma06g01048 307 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 153 253 IPR005123 -
Gma06g01048 307 SUPERFAMILY Clavaminate synthase-like 2 300 - -
Gma06g01048 307 Gene3D - 2 307 IPR027443 -
Gma06g01048 307 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01048 Gma-Chr6 9824154 9826113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01048 1 270 Glycosyltransferase AT5G59530 33.569 2.98e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01048 K05933 - gmx:100790622 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01048 06 9824154 9826113 Gma06g01048 06 9824154 9826113 ECH
Gma04g02348 04 53914357 53916246 Gma06g01048 06 9824154 9826113 GST