Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01035 ATGAAGTCGTTGCATTTGAGAACCATCATCCAGTTCCCGGCGATGACGAACAAGAGAAAAAGATCCCAGAAACATACCCCACCACCTCCTCCTCCCTCAACACCCCCAACTCCACAAACCCAAGCCCGCCACTCCCTCAACACCGCAAAAGCCCGGGCCTGGGCCCCTCTCAGCCTCACCCGCCACGAACTCTCCTTACCCCTCACCTTCCCCACGGGCCAAACCTTCCTCTGGAAAAACACCGCCCCTTCACAATACACCGGAGTCGTCGGGCCCCACCTCATTTCCCTCAAGCACCTCCAAAACGGCGACGTTTCCTACTGCCTCCACTCCCCCTCCCACTCCGACACCGCCGAAACTGCCCTGCTTGACTTCCTAAATGCCACCGTTTCGCTCGCCGACTTATGGAAGACGTTTTCCGCTTCCGACGCAAGGTTCGCCGAGCTCGCGCACCACTTAAGCGGCGCCCGAGTCCTCCGGCAAGACCCTTTCGAGTGTTTGATTCAGTTTCTGTGCTCTTCTAATAACAACATCGGAAGAATCACGAAAATGGTGAATTACGTGTCCTCCCTGGGAACTCACGTGGGAGACGTTGGAGAGTTTCAGTTCCACGCTTTCCCTTCTTTGGAACAACTTTCCTCCGTCTCAGAGCAACAACTCAGAGACGCCGGTTTCGGTTACAGGGCTAAATATATAATTGGTACGATTAATGCATTGAAATCAAAACCCGGTGGAGGCGAAGAATGGCTTCGTTCTCTTCGTAAGATGGAGCTTCGAGATGTTATATCTGCACTTTGTACGTTACCCGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTTTCGCTTGATCAGCACCATGCTGTTCCTGTTGACACACACGTGTGGCGGATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCCAAGCTCTGCGATCGTGTTGCAGAGGCGTTTGTAACCAAATATGGTAAATATGCTGGCTGGGCGCAGACTCTATTGTTCATAGCTGAATTACCCTCACAAAAAGCCCTCCTACCTTCACATTTGTTGACTGTTAAACAACGCAATGCTGCAAAGATAGAAGGCAGCGAAGAAGAAGTTGATTGA 1128 0.5195 MKSLHLRTIIQFPAMTNKRKRSQKHTPPPPPPSTPPTPQTQARHSLNTAKARAWAPLSLTRHELSLPLTFPTGQTFLWKNTAPSQYTGVVGPHLISLKHLQNGDVSYCLHSPSHSDTAETALLDFLNATVSLADLWKTFSASDARFAELAHHLSGARVLRQDPFECLIQFLCSSNNNIGRITKMVNYVSSLGTHVGDVGEFQFHAFPSLEQLSSVSEQQLRDAGFGYRAKYIIGTINALKSKPGGGEEWLRSLRKMELRDVISALCTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCDRVAEAFVTKYGKYAGWAQTLLFIAELPSQKALLPSHLLTVKQRNAAKIEGSEEEVD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01035 375 Gene3D - 40 126 - -
Gma06g01035 375 SUPERFAMILY DNA-glycosylase 162 343 IPR011257 GO:0003824|GO:0006281
Gma06g01035 375 SMART endo3end 172 345 IPR003265 GO:0006284
Gma06g01035 375 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 53 360 - -
Gma06g01035 375 SUPERFAMILY TATA-box binding protein-like 51 161 - -
Gma06g01035 375 PANTHER N-GLYCOSYLASE/DNA LYASE 53 360 - -
Gma06g01035 375 CDD ENDO3c 164 342 IPR003265 GO:0006284
Gma06g01035 375 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 57 167 IPR012904 GO:0003684|GO:0006289|GO:0008534
Gma06g01035 375 MobiDBLite consensus disorder prediction 12 47 - -
Gma06g01035 375 Pfam HhH-GPD superfamily base excision DNA repair protein 168 303 IPR003265 GO:0006284
Gma06g01035 375 Gene3D Hypothetical protein; domain 2 162 286 - -
Gma06g01035 375 Gene3D - 134 345 IPR023170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01035 Gma-Chr6 9686572 9688379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01035 K03660 - gmx:100789749 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01035 06 9686572 9688379 Gma06g01035 06 9686572 9688379 ECH