Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01028 ATGGCGGGTACGGTTTCGACTTGTTTCTTCTTCGTGTTTCTTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCCTCGGAGAAGGAGTTCGTACTCACATTGGATCACTCTAACTTTCACGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCCCCATGGTGTGGTCACTGTAAGAAGCTTGCTCCGGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCTATTGTTTTGGCTAAAGTAGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCACAATATGATGTTAAGGGATTCCCAACAATTAATATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTTATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGATTATGACTTTGGTCACACTCTGAATGCCAAACTCCTTCCAAGAGGAGAGTCATCAGTTTCTGGGCCCGTAGTTAGGCTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAGTTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGAACCGAGCAATCACCCTTTCGTTGTCAAATTCTTCAACAGTCCCAACGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAAGCTATCAAATCAAAATACCGTGAAGCTGCTGAGCAATATAAACAACAGGGTGTCAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAGCAAGTACCTCTAATTATCATTCAACATAATGATGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACCTGGTTGAAGGCATACAAGGATGGTCATGTTGCACCATTTGTTAAGTCTGAACCCATTCCCGAGACTAACGATGAACCTGTTAAAGTGGTAGTTGGGGCCAGTCTTGAGGACATTGTTTTCAAATCTGGGAAGAATGTTCTGCTGGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCAATATTGGATGAAGTTGCTATCTCATATCAAAATGAAGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATATCCCAAGTGAAACCTTTGATGTCCAAGGTTATCCTACCGTGTACTTCAGGTCAGCAAGTGGAAAGTTATCACAATACGACGGCGGTAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAACCGGGATAAACCTGCTCagcaagaacaaggaaaagatgagcaagaacaaggaaaagatgagcTTTGA 1512 0.4114 MAGTVSTCFFFVFLLSLLLPFQISAEESSEKEFVLTLDHSNFHDTVSKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPIVLAKVDANEEKNKDLASQYDVKGFPTINILRNGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATAFIGENKVAIVGVFPKFSGEEFDNFSALAEKLRSDYDFGHTLNAKLLPRGESSVSGPVVRLFKPFDELFVDFQDFNVEALEKFVEESSTPVVTVFNNEPSNHPFVVKFFNSPNAKAMLFINFTAEGAEAIKSKYREAAEQYKQQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKPNLEADHIPTWLKAYKDGHVAPFVKSEPIPETNDEPVKVVVGASLEDIVFKSGKNVLLEFYAPWCGHCKQLAPILDEVAISYQNEADVVIAKLDATANDIPSETFDVQGYPTVYFRSASGKLSQYDGGRTKEDIIEFIEKNRDKPAQQEQGKDEQEQGKDEL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01028 503 ProSitePatterns Thioredoxin family active site. 53 71 IPR017937 -
Gma06g01028 503 PRINTS Thioredoxin family signature 52 60 - -
Gma06g01028 503 PRINTS Thioredoxin family signature 60 69 - -
Gma06g01028 503 PRINTS Thioredoxin family signature 105 116 - -
Gma06g01028 503 CDD PDI_a_PDI_a'_C 377 479 - -
Gma06g01028 503 Gene3D Glutaredoxin 247 372 - -
Gma06g01028 503 SUPERFAMILY Thioredoxin-like 345 483 IPR036249 -
Gma06g01028 503 PANTHER PROTEIN DISULFIDE ISOMERASE 5 496 - -
Gma06g01028 503 CDD PDI_b_family 146 242 - -
Gma06g01028 503 Gene3D Glutaredoxin 22 141 - -
Gma06g01028 503 MobiDBLite consensus disorder prediction 481 503 - -
Gma06g01028 503 SUPERFAMILY Thioredoxin-like 243 375 IPR036249 -
Gma06g01028 503 Pfam Thioredoxin 34 140 IPR013766 -
Gma06g01028 503 Pfam Thioredoxin 379 481 IPR013766 -
Gma06g01028 503 ProSiteProfiles Thioredoxin domain profile. 356 484 IPR013766 -
Gma06g01028 503 TIGRFAM pdi_dom: protein disulfide-isomerase domain 383 482 IPR005788 GO:0003756
Gma06g01028 503 TIGRFAM pdi_dom: protein disulfide-isomerase domain 38 141 IPR005788 GO:0003756
Gma06g01028 503 PANTHER PROTEIN DISULFIDE-ISOMERASE 5 496 - -
Gma06g01028 503 SUPERFAMILY Thioredoxin-like 34 144 IPR036249 -
Gma06g01028 503 Gene3D Glutaredoxin 373 486 - -
Gma06g01028 503 SUPERFAMILY Thioredoxin-like 147 246 IPR036249 -
Gma06g01028 503 CDD PDI_a_family 35 138 - -
Gma06g01028 503 CDD PDI_b'_family 261 357 - -
Gma06g01028 503 Coils Coil 280 300 - -
Gma06g01028 503 Pfam Thioredoxin-like domain 170 353 - -
Gma06g01028 503 Gene3D Glutaredoxin 142 246 - -
Gma06g01028 503 TIGRFAM ER_PDI_fam: protein disulfide isomerase 34 503 IPR005792 GO:0003756
Gma06g01028 503 ProSitePatterns Thioredoxin family active site. 398 416 IPR017937 -
Gma06g01028 503 ProSiteProfiles Thioredoxin domain profile. 12 143 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01028 Gma-Chr6 9607768 9611347 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01028 K09580 - gmx:100788687 991.104