Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01017 ATGAACGCCATTGCAACTGCTGCACTTCTCTCTCTCCCTTTCTCCTTCTCCAAATCATCCAAGCTTGACACCAAAAAGGGTTTGAAAGGAAGGTTTAGAGTGTTTGCTGTATATGGAGAAGAGATAGATAAGAAGAGTACATGGAGTGCGCTCTTTGATGTGGAGGATCCAAGATCCAAAGTGCCGCAGTATAAAGGGAAGTTTTTGGATGTATATCAAGCCCTTGAATTTGCAAGATATGATATTCAATACTGTGATTGGCGAGCTCGCCAAGACTTGCTTGCCATCATGCTTCTCCATGAAAAGGTGGTGGAGGTTCTTAATCCTTTAGCTCGTGATTATAAGTCCATTGGCACCATGAAAAAGGAGCTAGCAGGGTTGCAGGAAGAATTGGCACTAGCACACCAACAGGTTCATATATCTGAGGCAAGGGTGTCCACTGCTTTAGATAAACTAGCTTACATGGAAGAATTAGTAAACGATAAGTTGTTGCAAGAAAGAACCACAACCGAAGTTTCCCAGACATCCTCTTCTCCCAGTACTTCTTTTAAACCTGTAGATGTAGAAAAGAGAAGACCGCCACGAAAAAGCTTGGACATATCAGGTCCAGTTCAGTCATACCATACCCACTTGAAGAATTTCTGGTACCCTGTAGCTTTCTCTACTGACTTGAAGGATGATACAATGATCCCAATAGAATGTTTTGAGGAACCATGGGTCATTTTTCGAGGGAAAGATGGGAAGCCTGGATGTGTTCAAAATACCTGCGCACACAGAGCATGCCCTCTGCACCTTGGTTCTGTGAAGGAGGGTCGTATCCAATGTCCTTACCATGGCTGGGAATATACTACTGATGGAAAATGTGAGAAAATGCCATCTACTCGACTGCTAAATGTGAAGATAAAGTCATTGCCATGTTTTGAAAAAGAGGGAATGATCTGGGTTTGGCCTGGCAATGACCCCCCAACAGCTACCCTTCCATCTTTGCTACCTCCGTCTGGGTTTGAAGTGCATGCTGAGATTGTCATGGAGCTTCCCATCGAACATGGGTTACTTTTGGACAACCTTTTGGATCTTGCACATGCCCCTTTTACTCACACTTCAACTTTTGCTAAGGGATGGAGTGTTCCCAGCTTGGTGAAATTCTTGACACCTGCATCTGGCCTACAAGGATACTGGGACCCCTATCCAATTGATATGGAGTTTCGACCACCTTGCATGGTTCTATCAACCATTGGAATTTCAAAGCCTGGTAAACTGGAAGGACAAAGCACCAGTCAGTGTGCCACACACCTGCACCAACTTCATGTCTGCTTACCATCTTCAAAACAAAAAACAAGATTGCTATACAGAATGTCACTGGATTTTGCTCCTGTGCTTAAGCATATTCCTTTTATGCAACATCTATGGAGATATTTTGCAGAGCAGGTTTTAAACGAGGATCTACGGCTAGTGTTAGGCCAGCAAGAGCGGATGAACAACGGTGCAAATGTGTGGAATTTCCCAGTATCCTATGACAAGCTTGGGGTAAGGTACAGACTATGGAGAAATGCCTTGGAGCAAGGAACTAAGCAACCACCCTTCAGCAAATGA 1593 0.4407 MNAIATAALLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEEIDKKSTWSALFDVEDPRSKVPQYKGKFLDVYQALEFARYDIQYCDWRARQDLLAIMLLHEKVVEVLNPLARDYKSIGTMKKELAGLQEELALAHQQVHISEARVSTALDKLAYMEELVNDKLLQERTTTEVSQTSSSPSTSFKPVDVEKRRPPRKSLDISGPVQSYHTHLKNFWYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVKEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQVLNEDLRLVLGQQERMNNGANVWNFPVSYDKLGVRYRLWRNALEQGTKQPPFSK 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01017 530 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 70 530 - -
Gma06g01017 530 Pfam Rieske [2Fe-2S] domain 215 296 IPR017941 GO:0051537
Gma06g01017 530 Gene3D - 337 525 - -
Gma06g01017 530 SUPERFAMILY Bet v1-like 311 524 - -
Gma06g01017 530 Pfam Pheophorbide a oxygenase 402 497 IPR013626 GO:0010277
Gma06g01017 530 Gene3D - 208 331 IPR036922 GO:0051537
Gma06g01017 530 MobiDBLite consensus disorder prediction 166 201 - -
Gma06g01017 530 CDD Rieske_RO_Alpha_Cao 198 326 - -
Gma06g01017 530 MobiDBLite consensus disorder prediction 166 184 - -
Gma06g01017 530 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 70 530 - -
Gma06g01017 530 SUPERFAMILY ISP domain 209 320 IPR036922 GO:0051537
Gma06g01017 530 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 215 315 IPR017941 GO:0051537
Gma06g01017 530 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 256 278 IPR015881 GO:0005506|GO:0051537
Gma06g01017 530 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01017 Gma-Chr6 9501987 9507564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01017 K13600 - gmx:100780485 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01017 06 9501987 9507564 Gma06g01017 06 9501987 9507564 ECH