Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01014 ATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCTAGCAGTTATTCCGTGGATTTGAAGAAAGACCTTTTCCTCCAATTGCAGAGTCAAAGTTTAAGGCCTAAGTTCTCTCAACTCTCATTCAACCCACTTCCACCATCAACTTCTTCCTTTTCTTCACCCCGTACATTCACAACCCTGGCTCTCTTCAAATCTAAGACAAAAGCCGCTCCTGCTAAGACTAAGGTTACAAAGCCAAAGCAAAAGGTTGAAGATGGTATCTTTGGCACTTCTGGAGGATTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCTATGCTTGGTTTTGCAGCATCATTGTTGGGTGAAGGAATAACTGGGAAAGGAATCCTAGCACAATTAAACCTGGAAACTGGAATTCCCATTTATGAAGCGGAGCCTCTTCTTCTGTTTTTCATCCTCTTCACCCTGCTAGGAGCCATTGGAGGTTTAGGTGACCGTGGAAAATTTGTCGATGACGAACCTACTACTGGAGGTGTTATTCCTTCAGGCAAAGGCTTCAGGGAAGCCCTTGGGCTCGGTTCAGGTCCTTTATTCGGATTCACGAAAGCGAACGAGCTATTTGTGGGAAGATTGGCTCAATTGGGTTTCGTTTTCTCATTGATTGGAGAAATTATTACTGGAAAGGGAGCTCTAGCCCAACTCAACATTGAGACGGGGGTACCAATCAACGAAATCGAGCCCCTAGTGTTGTTCAACGTTCTTTTCTTCTTCATTGCTGCTTTGAATCCTGGAACTGGCAAATTCGTTACAGATGACGGGGAGGATGATTAG 822 0.4465 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPPSTSSFSSPRTFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPTTGGVIPSGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTDDGEDD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01014 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 194 258 - -
Gma06g01014 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 184 - -
Gma06g01014 273 Pfam Chlorophyll A-B binding protein 66 217 IPR022796 -
Gma06g01014 273 PANTHER PHOTOSYSTEM II SUBUNIT S 1 184 - -
Gma06g01014 273 PANTHER PHOTOSYSTEM II SUBUNIT S 194 258 - -
Gma06g01014 273 SUPERFAMILY Chlorophyll a-b binding protein 82 251 - -
Gma06g01014 273 Gene3D Chlorophyll a/b binding protein domain 138 243 - -
Gma06g01014 273 Gene3D Chlorophyll a/b binding protein domain 54 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01014 Gma-Chr6 9487763 9489661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01014 K03542 - gmx:100807355 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01014 06 9487763 9489661 Gma06g01014 06 9487763 9489661 ECH
Gma04g02384 04 54195013 54196973 Gma06g01014 06 9487763 9489661 GST