Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01006 ATGGCAGAAGACAGCGAAGGGACGGCAAAGAAGGAGGAGATTTTAGAGTCTCAGATTGAAACCGCTATGCGCTCTCGCGTTTCTCTCTTCAAGGAACAATCTGACTCCTTGACGTTCGAGGGTGTTCGTCGATTGCTCGAGAAAGACCTGGGATTGGAGGAGTATGCTTTGGATGTGCATAAGAGATTTATCAAGCAATGCTTGCTCAAGTGCTTAGAAGGGGTTGGAGATGATGATGGGGCAAAGATATCAGGGAAAGAAGGGGAAAAAGGTACAAGTACACAAGAGTCAGAAGAACCAAAAGAAGAATGTGAAGCAAAAGATGCGAAGGATCTTTGCCCTGAAGATGAGGAGAAAATGGAAGACTCTCCAGTCTTAGGTCTTCTTAAAGAACAAAAAAGGGCTAAACTTGAAACCAAGGATGATAAAGGCAATGGAACCAAAGTAGTTCCAATTGAGGCCCTAATTAAGAAAGCTGTTAGAAAAAGATCTTCGTACATCAAGGCTAATGCAGAGAAAATCACTATGGCTGGTCTTCGTCGACTCTTGGAGGAAGATCTTAAACTTGATAAATTTACTCTGGATCCCTATAAGAAGTTTGTAAGTCAACAGCTTGATGAGGTATTAGCATCGTCTGAAGTTCCCAAACCTTCAAATAATGCTAAGAAAATTGTTAAGAAAAAACCTGATACCAAAGTAACTAAAAAGGTCAGCAGTGAAGAGAACTCTGATACTTCAGATAAGGAGACTGATGAGGAAGAGAGTGAGGAAGATGAAGTTAAACCTAGGAAAAAAATTGTTCCAAAAGGCAAGGTGAAGACTTCTGTCCAACCCAAAAAGCGTAAAGGAGAGGAGACTGATCTATCCAGTAAGAAAAGGGTCAAACCTGCTAAAGCAACCTCAGAAGACAATAGTGATGCAGAAGATGATGGGAAGAACTCTGAAGATGATCAGTCCTCTTCATCACCTGAGAAACCTTCCAAGAAGAAAGAAGTTTCAACTCCTGTGTATGGTAAACATGTGGAGCACTTAAAGTCTGTTATTAAAGCATGTGGAATGAGTGTTCCTCCTGTAATTTACAAAAAAGTCAAGCAAGTGCCTGAAAACAAACGAGAAGAGCAGCTAATTAAGGAGTTGGAGGAAATACTGTCTAGAGAAGGGCTGTCTTCAAATCCATCTGAAAAGGAAATCAAGGAAGTAAAAAGGAAGAAGGCGAGAGCCAAAGAACTTGAGGGTATTGATCTAAGCAATATTGTGTCAAGTTCACGTAGAAGATCAACAAGTAGTTATACATCTCCTCCACCTCCAAAGCCGAAGGTTCCAGTTGAAACTAGTGGCAATGGGGCTGAATGTAGTGATAATGATGATGAAGACAATGATAATGAAGAGGATGAGGAAGAGGATAGTGGTGACGATGATGGAAGTCAGAGTGAAGAATTTAATGATGATGAAGAGGACAGTGATTGA 1467 0.4083 MAEDSEGTAKKEEILESQIETAMRSRVSLFKEQSDSLTFEGVRRLLEKDLGLEEYALDVHKRFIKQCLLKCLEGVGDDDGAKISGKEGEKGTSTQESEEPKEECEAKDAKDLCPEDEEKMEDSPVLGLLKEQKRAKLETKDDKGNGTKVVPIEALIKKAVRKRSSYIKANAEKITMAGLRRLLEEDLKLDKFTLDPYKKFVSQQLDEVLASSEVPKPSNNAKKIVKKKPDTKVTKKVSSEENSDTSDKETDEEESEEDEVKPRKKIVPKGKVKTSVQPKKRKGEETDLSSKKRVKPAKATSEDNSDAEDDGKNSEDDQSSSSPEKPSKKKEVSTPVYGKHVEHLKSVIKACGMSVPPVIYKKVKQVPENKREEQLIKELEEILSREGLSSNPSEKEIKEVKRKKARAKELEGIDLSNIVSSSRRRSTSSYTSPPPPKPKVPVETSGNGAECSDNDDEDNDNEEDEEEDSGDDDGSQSEEFNDDEEDSD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01006 488 MobiDBLite consensus disorder prediction 80 128 - -
Gma06g01006 488 MobiDBLite consensus disorder prediction 382 488 - -
Gma06g01006 488 MobiDBLite consensus disorder prediction 211 339 - -
Gma06g01006 488 SMART CHZ_2 404 439 IPR019098 -
Gma06g01006 488 MobiDBLite consensus disorder prediction 314 339 - -
Gma06g01006 488 MobiDBLite consensus disorder prediction 223 244 - -
Gma06g01006 488 MobiDBLite consensus disorder prediction 450 488 - -
Gma06g01006 488 MobiDBLite consensus disorder prediction 391 411 - -
Gma06g01006 488 PANTHER HIRA-INTERACTING PROTEIN 3 1 487 IPR037647 -
Gma06g01006 488 MobiDBLite consensus disorder prediction 277 307 - -
Gma06g01006 488 MobiDBLite consensus disorder prediction 415 430 - -
Gma06g01006 488 Pfam Histone chaperone domain CHZ 406 436 IPR019098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01006 Gma-Chr6 9404118 9408814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01006 2 73 EF-hand Containing Proteins AT1G44780 41.667 3.24e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01006 - - gmx:100784437 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01006 06 9404118 9408814 Gma06g01006 06 9404118 9408814 ECH
Gma04g02392 04 54262918 54269629 Gma06g01006 06 9404118 9408814 GST