Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00963 ATGGCTACTTTTCTTTCCAACCAATCTCTGTTGGGTTCTTGTCCTTGTTCTACTCCCTTCTCTTCAAAGCCCTTTCAAACCCTAAAACCCCAAATCTTATCTTTTCCATCTCGCGGGTTTCCGCGCCCCCTAATTTCCTCAGTCAATCGAAGAACCCAATTGAAGTCTTCCCAAGATTTCCCTCCAACTACAAATGATGAAACAGAGGAGACCCAGAATGATGTAAGAGGGACAAATGATGATGAAGATAAAAAACAAGTACCTAGTTTAATGATCCTCCTTGAAGCATACAAGGAAGCCTTTTTTAATGGCGACCAAAATACCGTAGCTCAGATTGAAGAGGGGATATATTCAATAGCAAATAGGAAAAATAAATTGATTCAGAAATTATCAAGTTTATCGGCAGACAAAGCTGCTTCCAAGAAGAGTTATCTTCGTTTACAAGCTGATTTTGATAATTTTAGGAAAAGGACTGACAAAGAGAGACTTAACATCCAATCCGATGCCCAGCAACAAGTCATTGAAAAGCTTTTGTTGATGGTCGACAATTTTGAGAGAACCCAACAGCAAATTAAAGCAGCAACAGAGAAAGAGAAGAAAATTGGTGTTAGCTATCAAGGTATTTACAAACAATTTGTAGAGGTTCTGAGGAATCATAATGTTTCAGTGGTAGCAACAGTGGGCAAGCCGTTTAATCCCTTGCAACATGAAGCCGTTGCACGTGAGGAGTCCACAGAGTTCAAAAAAGGGATTATAATTAAAGAATCCCGACGTGGTTTCTTGCTCAGAGATCGAGTTCTAAGGCCAGCCCTTGTCAAGGTTTCCTTAGGTCCTGGAAATAAGAAATCTCCCGTGTCTCCTGACAAGTCTGTGGAGCAACCTTCAACAGCTGCTGGAATAGATGAAAGATAG 912 0.4057 MATFLSNQSLLGSCPCSTPFSSKPFQTLKPQILSFPSRGFPRPLISSVNRRTQLKSSQDFPPTTNDETEETQNDVRGTNDDEDKKQVPSLMILLEAYKEAFFNGDQNTVAQIEEGIYSIANRKNKLIQKLSSLSADKAASKKSYLRLQADFDNFRKRTDKERLNIQSDAQQQVIEKLLLMVDNFERTQQQIKAATEKEKKIGVSYQGIYKQFVEVLRNHNVSVVATVGKPFNPLQHEAVAREESTEFKKGIIIKESRRGFLLRDRVLRPALVKVSLGPGNKKSPVSPDKSVEQPSTAAGIDER 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00963 303 Hamap Protein GrpE [grpE]. 65 276 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 PANTHER GRPE PROTEIN 1 294 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 222 276 IPR009012 GO:0006457
Gma06g00963 303 PANTHER GRPE PROTEIN HOMOLOG 1 294 - -
Gma06g00963 303 Pfam GrpE 121 275 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 MobiDBLite consensus disorder prediction 47 68 - -
Gma06g00963 303 CDD GrpE 141 274 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 MobiDBLite consensus disorder prediction 69 84 - -
Gma06g00963 303 Gene3D - 104 217 IPR013805 -
Gma06g00963 303 Gene3D Head domain of nucleotide exchange factor GrpE 221 275 IPR009012 GO:0006457
Gma06g00963 303 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 124 219 IPR013805 -
Gma06g00963 303 MobiDBLite consensus disorder prediction 275 303 - -
Gma06g00963 303 ProSitePatterns grpE protein signature. 231 274 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 PRINTS GrpE protein signature 145 161 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 PRINTS GrpE protein signature 173 188 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 PRINTS GrpE protein signature 228 243 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 PRINTS GrpE protein signature 255 274 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Gma06g00963 303 MobiDBLite consensus disorder prediction 47 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00963 Gma-Chr6 8954752 8958345 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00963 K03687 - gmx:100809893 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00963 06 8954752 8958345 Gma06g00963 06 8954752 8958345 ECH