Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00962 ATGGACTCCCAACCGGGTCTCTCTCTCGGGTTAAGCGCCACTCTCTCATCACCCGCGGCTCCACTCAGTGACACCACCTCTGTTCCGTGGCGTTTATTCAACGAAAGACACCCCAAAAAGGAAGAGCAACAAGAAGAAGAAAAAGAAGACGAAGACGGTGGTGAAACGATTAACTTCATGGACCAGCGCGTGAAGAGGAAGATAGAGGGACACCAACAACAACCCTGTTTCCCTTCAAAGCGCGTGGCCGTGGATTCCTCAGTGGGGTGGTGGAACCAGCCACTGGGCGTTGCAGACCCCGAGATTTTCGATATCATGCAGAAGGAAAAACGAAGACAATTCAAGGGAATTGAGTTAATTGCTTCCGAAAACTTCGTGTGCAGAGCAGTGATGGAAGCTTTGGGAAGCCATTTAAGCAACAAATACTCCGAGGGAATGCCTGGTGCTAAGTACTACACTGGTAATCAATACATTGATGAAATCGAGTTTCTATGTTGCCAGCGTGCGTTGTTGGCTTTTGATCTTCACCCCAACAATTGGGGCGTTAATGTTCAACCTTATTCTTGTACTTCTGCTAATTTCGCTGTGTACACCGGGATTTTGCACCCTGGGGATAGGATCATGGGTCTTGATTCGCCTTCTGGGGGGCATTTGAGTCATGGTTATTATACTCTTGGTGGGAAGAAGGTTTCTGCTGCTTCTATTTTCTTCGAGACTTTGCCTTATAAGGTTAACCCGCAGAGTGGTTACATAGACTATGATAAGCTTGAGGAGAAAGCGATGGATTTTAGGCCCAAAATACTTATCTGTGGTGGGAGTTCGTATCCCAGAGAATGGGATTACGCGAGGTTCAGACAGGCTGCTGATAAGTGTGGCGCGGTGTTGATGTGTGACATGGCTCATATCAGTGGTCTTGTGGCGGCTAAGGAAGTAGCTAGTCCATTTGATTACTGTGATATTGTTACCTCAACCACTCACAAAAGTCTCCGAGGTCCAAGGGGAGGTATCATCTTTTATAGAAGGGGAATAAAACTAAGGAAGCAAGGTTTTGTTCATAATCATGGAGATGATAGTAATTATGATTTTGAGGAGAAAATAAACTTTGCTTTGTATCCATCATTACAAGGAGGCCCCCACAATAATCATATTGCTGCTCTTGCCATAGCTTTAAAACAAGTTGCAACTCCAGAGTACAAAGCATACATGCAGCAGGTGAAGAGAAATGCACAGGCATTAGCATCTGCCTTGTTGAGAAGAAATTTCAAATTGGTGACTGATGGGACCGACAATCATCTTTTGCTGTGGGATCTAACAGCACTTGGCTTAATTGACAGAAACTATGAAAAGGTCTGTGAGGCGTGTCACATCACTCTCAATAAATGTGCCATTTATGGTTCGATTTCTCCTGGAGGAGTGAGAATTGGTACTCCTGCAATGACATCTAGAGGCTGTTTAGAGGAAGATTTTGAAACCATAGCTGATTTTCTTCTTAGGGCAGCTCAGATTACCAGCATTGTGCAAAGGGAGCATGGGAAGTCATGCAAAGATTTCCTCAAGGGTCTTCAGAATAACAAAGATATTTCTGAACTCAGAAATCGGGTTGAGACATTCAGTTCTCAGTTTGCAATGCCAGGATTCGATATTTGA 1647 0.4457 MDSQPGLSLGLSATLSSPAAPLSDTTSVPWRLFNERHPKKEEQQEEEKEDEDGGETINFMDQRVKRKIEGHQQQPCFPSKRVAVDSSVGWWNQPLGVADPEIFDIMQKEKRRQFKGIELIASENFVCRAVMEALGSHLSNKYSEGMPGAKYYTGNQYIDEIEFLCCQRALLAFDLHPNNWGVNVQPYSCTSANFAVYTGILHPGDRIMGLDSPSGGHLSHGYYTLGGKKVSAASIFFETLPYKVNPQSGYIDYDKLEEKAMDFRPKILICGGSSYPREWDYARFRQAADKCGAVLMCDMAHISGLVAAKEVASPFDYCDIVTSTTHKSLRGPRGGIIFYRRGIKLRKQGFVHNHGDDSNYDFEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKRNAQALASALLRRNFKLVTDGTDNHLLLWDLTALGLIDRNYEKVCEACHITLNKCAIYGSISPGGVRIGTPAMTSRGCLEEDFETIADFLLRAAQITSIVQREHGKSCKDFLKGLQNNKDISELRNRVETFSSQFAMPGFDI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00962 548 MobiDBLite consensus disorder prediction 1 56 - -
Gma06g00962 548 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 319 335 IPR019798 GO:0030170
Gma06g00962 548 MobiDBLite consensus disorder prediction 1 30 - -
Gma06g00962 548 Gene3D Aspartate Aminotransferase, domain 1 99 544 IPR015422 GO:0003824
Gma06g00962 548 SUPERFAMILY PLP-dependent transferases 90 545 IPR015424 -
Gma06g00962 548 Hamap Serine hydroxymethyltransferase [glyA]. 94 545 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma06g00962 548 Pfam Serine hydroxymethyltransferase 97 495 IPR039429 -
Gma06g00962 548 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 69 548 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma06g00962 548 CDD SHMT 99 537 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma06g00962 548 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 7 69 548 - -
Gma06g00962 548 Gene3D - 124 403 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00962 Gma-Chr6 8945332 8950415 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00962 K00600 - gmx:100776419 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00962 06 8945332 8950415 Gma06g00962 06 8945332 8950415 ECH