Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00960 ATGGCTGAAAGTTCGGAATGCATTGAGGTGAAGGTCTCTCCTGCACATGACCAAAGGATTCCGTTGATGAGATCAAGAAGAGGAGGACGGCGGCGGCGCGGCGACACGTGGGTGGTGTCGGTGTTCGTGATAATCCAGATCGGGGTTTTCATCGCCACCATGCTCGTCAACGATTGCTGGAACAATTCTCACGGCGATTGCGTTCTTCAAGCCCTCGGAAGGTTCTCGTTCCAGCCTCTCCCCGAGAATCCTCTCTTAGGTCCTTCTCAGTCCAAGTTGGATGAAATGGGAGCTCTTCGACGTAGCCTTTTGACAGAGCATCATCAAACATGGCGTCTTTTCACATTTCCATTTTTGCATGCTGGGGTCTTCCACCTGCTGCTCAATCTCTCCAGTGTCATCTATGTCGGAGTTAGCCTAGAACACCACTTTGGACCAATAAGGATTGGTATAATCTATGCATTGTCTGCTTTTGTGGGTTCCTTGGTGGCTTCTCTTTTTCTCCAAAACATGCCCGCTGTTGGTGCTTCCGGTGCTTTATATGGATTATTGGGAACATTGCTTTCGGAACTTGTTTGGAACTGGAAATTTCATTCCAATAAGATTTCAGCAATAGCATCATTAGTCTTTGTCTTTGTGTGCAACTTCGTCCTTGGTTTTCTGCCTTATGTAGACAATTTTGCAAGCATTGGAGGTTTCATATCAGGATTCCTTCTTGGATCTGTTTTTTTACTCAGCCCTCAGCTCCAACCAGTAGCTCCAAATAAAGGAGGTCTGATTGATTATGGTGTCAAAAGTTGCATCAAGCTAAAGTTGAAGCAAAAGCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTATCCTCTTCAGCCTTTTATTGGCTGGTTGTCTTGTGGCAGTTCTTCATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTCGACTGTATCCCTTTTACAAGCTGGCACTGCAAAGACACAGAAACCTCTTGTGAGACAATGGTGAGCAATGCTCAGCTGACAATGACCTGTATTGGGAATGGCAATTTCCGACATAATTACATAATTGCATCTGTGAACTGTGCTCTGTTATTGAGTATGCCCTCGCCGCCGCCGCCGCCGCCACCACCGCATTTACAGTTAAAGGCCATCAAGCCACAAGTGAGTGCACTGACACTTAACAATCCAGTGTGGGCCTATGCCTACCAAATACGCATTGGGTTCAAAGTTTTTGCACATTAA 1248 0.4599 MAESSECIEVKVSPAHDQRIPLMRSRRGGRRRRGDTWVVSVFVIIQIGVFIATMLVNDCWNNSHGDCVLQALGRFSFQPLPENPLLGPSQSKLDEMGALRRSLLTEHHQTWRLFTFPFLHAGVFHLLLNLSSVIYVGVSLEHHFGPIRIGIIYALSAFVGSLVASLFLQNMPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQPVAPNKGGLIDYGVKSCIKLKLKQKLDRPVLRIVSLILFSLLLAGCLVAVLHGININSYCTWCPYVDCIPFTSWHCKDTETSCETMVSNAQLTMTCIGNGNFRHNYIIASVNCALLLSMPSPPPPPPPPHLQLKAIKPQVSALTLNNPVWAYAYQIRIGFKVFAH 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00960 415 Pfam Rhomboid family 106 246 IPR022764 GO:0004252|GO:0016021
Gma06g00960 415 Gene3D - 32 246 IPR035952 -
Gma06g00960 415 PANTHER RHOMBOID-LIKE PROTEIN 8 12 354 - -
Gma06g00960 415 SUPERFAMILY Rhomboid-like 34 248 IPR035952 -
Gma06g00960 415 PANTHER RHOMBOID-RELATED 12 354 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00960 Gma-Chr6 8926090 8929756 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00960 - - gmx:100775875 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00960 06 8926090 8929756 Gma06g00960 06 8926090 8929756 ECH