Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00940 ATGAGTGTGGATTTGAACAAAACTGCCTCCAACAGTCATGATAAAATGGCAATATCAGCAGAACAGCAGGCAAAGATCATTGAGGTGAGAGGGTTGATAGGGCCACTATCTGATAAGGAATCTGTGTACTGTTCTGATGCTTCAATCTCAAGGTATTTAAGGGCACGAAATTGGAATGTCAAGAAGGCAGCTCAAATGTTGAAGCAAAGCCTAAAATGGAGAAAAGAATACAAGCCTCAAGAGATCCGCTGGGAAGAGGTTGCTGCTGTAGCAGAGAAAGGGATGTTGTATAGACCAAATTATTCTGACAAGTATGGGAGACCAGTGATTGTAATGAGACCTTGTAACAAGAAATCAACACCAGCACAGGACATGATTAAGTATTTTGTATACTGCATGGAGAATGCCATTATAAATCTGCCACCACACGAGGAACAGTTGGCCTGGCTGATAGATTTCCAGGGTGTCAAGATGTCAGATGTGTCATTCAAGACGTCACGTGAAACTGTCCATATATTACAAGAATATTATCCAAAGCATCTGGGTTTGGCAATGCTGTACAAAGCACCTAGGATCTTCCAACCATTCTTCTCGATGCTAAGGCCATTTCTAGAGACAGAGCTTTACAATAAAGTAAAGTTTGGGTATTCGGACGACCACAACACAAAGAAGATGTTGGAGGATTTGTTTGATATGGATAAACTTGAATCTGCATTTGGTGGGAATGATGATACAGGATTTGACATGAATAAATATGCAGAAAGAATGAAAGAGGATGAAAATAAGATTCTTTCTTTCTGGACACAGGCCAAACTCATGGGTTTCTTCGACGACCCTTGTGCAAAGCATTCATTTCTTGTTACAGATCGAGTGGCAGGATGCATTAATAAAGAAGCAGGAGCAGGAGCAGAACCTGAATCTACACTTGAACTAGTTCGGCGAGCACGCGTAAGTATTAAACAGCAGGCAAAGATCAATGAGGTGAGAAGGTTGATAGGGCCACTATCTGATAAGGAATCTTTGTACTGTTCTGATGCTTCCATCTCAAGGTATTTAAGGTTGCAATATTGGAATGTCAAGAAGGCAGCTCAAATGTTGAAACAGAGCCTCAAATGGAGAAAAGAATACAAACCTGAAGAAATTCGCTGGGAAGAGGTTGCTGAGGAAGCAGAGACAGGGATGATGTATAAACCAAATTATCATGACTAG 1209 0.4103 MSVDLNKTASNSHDKMAISAEQQAKIIEVRGLIGPLSDKESVYCSDASISRYLRARNWNVKKAAQMLKQSLKWRKEYKPQEIRWEEVAAVAEKGMLYRPNYSDKYGRPVIVMRPCNKKSTPAQDMIKYFVYCMENAIINLPPHEEQLAWLIDFQGVKMSDVSFKTSRETVHILQEYYPKHLGLAMLYKAPRIFQPFFSMLRPFLETELYNKVKFGYSDDHNTKKMLEDLFDMDKLESAFGGNDDTGFDMNKYAERMKEDENKILSFWTQAKLMGFFDDPCAKHSFLVTDRVAGCINKEAGAGAEPESTLELVRRARVSIKQQAKINEVRRLIGPLSDKESLYCSDASISRYLRLQYWNVKKAAQMLKQSLKWRKEYKPEEIRWEEVAEEAETGMMYKPNYHD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00940 402 PANTHER GH16843P 317 402 - -
Gma06g00940 402 SMART sec14_4 90 244 IPR001251 -
Gma06g00940 402 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 83 247 IPR001251 -
Gma06g00940 402 Pfam CRAL/TRIO domain 94 241 IPR001251 -
Gma06g00940 402 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 317 402 - -
Gma06g00940 402 PANTHER GH16843P 1 274 - -
Gma06g00940 402 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
Gma06g00940 402 Gene3D - 296 402 IPR036865 -
Gma06g00940 402 Gene3D - 3 274 IPR036865 -
Gma06g00940 402 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 274 - -
Gma06g00940 402 SUPERFAMILY CRAL/TRIO domain 84 260 IPR036865 -
Gma06g00940 402 Pfam CRAL/TRIO, N-terminal domain 25 68 IPR011074 -
Gma06g00940 402 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Gma06g00940 402 SMART CRAL_TRIO_N_2 344 369 IPR011074 -
Gma06g00940 402 SUPERFAMILY CRAL/TRIO N-terminal domain 318 385 IPR036273 -
Gma06g00940 402 CDD SEC14 90 242 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00940 Gma-Chr6 8714190 8722561 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00940 - - gmx:100802091 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00940 06 8714190 8722561 Gma06g00940 06 8714190 8722561 ECH
Gma04g00962 04 10048029 10052515 Gma06g00940 06 8714190 8722561 GST