Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00939 ATGGCCCTCAGCATCCTTTACCTGAGTCTGAGTCTCCTCACTGTCACTGTTCAGTCATCTAAACCAGAAGCACCTTTCGCTTGCGACTTCTCCAACCCTTCATCCAGATCCTACCCATTCTGCAACCCCAAGCTCCCCATTCCCCAAAGAACCAAAGACCTTCTCTCCCGTCTCACCTTGGACGAAAAGCTCTCCCAGCTGGTCAACACCGCCCCTCCCATCCCCCGCCTCGGCATCCCCGCCTACCAGTGGTGGAGCGAAGCCCTCCACGGCGTCTCAGGAGTCGGCCCCGGCATCCTCTTCGACAACAACTCCACCATCTCCTCCGCCACCAGCTTCCCTCAGGTCATCCTCACCGCCGCCTCCTTCGACTCCCGCCTCTGGTACCGAATCGGCCACGCCATCGGCATCGAAGCCAGGGCAATCTTCAATGCTGGCCAAGCCAATGGCCTCACGTTCTGGGCTCCTAATATCAACATCTTTAGGGACCCAAGATGGGGCAGAGGCCAAGAGACTGCTGGTGAAGACCCTCTCCTCACTTCTCGCTATGCGGTTTCTTTTGTCAGAGGCCTTCAAGGAGATTCCTTTAAGGGAGCCCATCTTCTAGCCTCTGCGTGCTGCAAGCATTTCACCGCTTATGATTTGGACAATTGGAAGGGCGTCGATCGCTTTGTCTTCGATGCTCGCGTATCTTTGCAAGATTTAGCGGACACATACCAGCCTCCGTTTCAGAGTTGCGTGCAGCAAGGACGAGCCAGTGGGATAATGTGTGCTTACAATCGTGTCAACGGAGTTCCCAACTGTGCTGATTACGGTCTGTTAACCCAAACCGCCAGAAATCAATGGGATTTCAATGGGTATATCACTTCGGATTGTGGAGCAGTGGGGTTCATACACGACAGGCAAAGGTATGCAAAATCACCAGAGGATGTTGTAGCCGATGTTCTTCGGGCTGGGATGGATTTGGAATGTGGTTCTTATTTGACATATCACGCTAAATCAGCAGTGTTGCAGAAAAAGTTAGGCATGTCTGAAATAGACCGTGCCCTTCAGAATCTGTTCTCTATTAGAATGAGGCTAGGCCTATTTGATGGAAATCCAACAAGGCTCTCATTCGGCTTGATTGGCTCCAATCATGTATGTTCCAAAGAGCACCAATATCTGGCTCTTGAAGCTGCAAGAAATGGCATAGTCCTCTTAAAAAACTCTCCCACACTTCTCCCACTTCCAAAAACAAGCCCCAGCATTTCCTTAGCAGTGATAGGTCCCAATGCCAATTCTTCTCCGCTAACTCTTCTTGGGAACTATGCTGGCCCTCCTTGTAAATACGTTACAATACTGCAAGGCTTTCGGCACTATGTTAAGAACGCGTTTTATCATCCCGGCTGTGATGGTGGACCCAAGTGTTCTTCCGCTCAAATAGACCAGGCAGTGGAAGTTGCAAAGAAAGTGGATTATGTGGTGCTGGTTATGGGATTGGATCAAAGTGAAGAGAGGGAAGAACGCGATCGCGTTCATCTTGACTTGCCGGGCAAGCAACTTGAACTCATTAACGGCGTTGCTGAAGCTTCTAAGAAACCAGTTATTTTGGTCCTCCTTAGTGGAGGGCCTTTAGATATCACTTCAGCCAAGTATAACCACAAAATTGGAGGAATTCTCTGGGCTGGTTATCCAGGGGAACTTGGAGGCATTGCACTTGCTCAGATTATCTTTGGTGACCACAATCCAGGAGGGAGACTACCAACTACTTGGTACCCAAAAGATTACATCAAAGTACCAATGACAGACATGAGGATGCGAGCTGATCCTTCAACCGGCTATCCCGGGAGAACTTACCGGTTTTACAAGGGTCCAAAGGTGTATGAGTTTGGCTATGGACTAAGCTACTCAAAGTATTCCTATGAGTTTGTTTCTGTCACACATGACAAGCTTCACTTCAACCAATCATCCACTCATTTGATGGTTGAAAATTCCGAAACCATAAGTTACAAACTAGTTTCGGAGTTGGATGAACAAACCTGCCAAAGCATGTCACTCTCAGTCACAGTGAGAGTTCAAAATCATGGAAGCATGGTGGGGAAGCATCCTGTATTGCTGTTTATTAGGCCTAAAAGACAGAAAAGTGGAAGTCCTGTGAAACAGTTGGTGGGTTTCGAGAGTGTTATGCTTGATGCAGGGGAAATGGCTCATGTTGAATTTGAGGTAAGCCCTTGTGAGCATCTTAGTAGAGCAAATGAGGCTGGTGCAATGATAATAGAAGAAGGGTCTCATATGTTGCTTGTGGATGATCTAGAGCATCCAATAGATATATATGTTTGA 2319 0.4825 MALSILYLSLSLLTVTVQSSKPEAPFACDFSNPSSRSYPFCNPKLPIPQRTKDLLSRLTLDEKLSQLVNTAPPIPRLGIPAYQWWSEALHGVSGVGPGILFDNNSTISSATSFPQVILTAASFDSRLWYRIGHAIGIEARAIFNAGQANGLTFWAPNINIFRDPRWGRGQETAGEDPLLTSRYAVSFVRGLQGDSFKGAHLLASACCKHFTAYDLDNWKGVDRFVFDARVSLQDLADTYQPPFQSCVQQGRASGIMCAYNRVNGVPNCADYGLLTQTARNQWDFNGYITSDCGAVGFIHDRQRYAKSPEDVVADVLRAGMDLECGSYLTYHAKSAVLQKKLGMSEIDRALQNLFSIRMRLGLFDGNPTRLSFGLIGSNHVCSKEHQYLALEAARNGIVLLKNSPTLLPLPKTSPSISLAVIGPNANSSPLTLLGNYAGPPCKYVTILQGFRHYVKNAFYHPGCDGGPKCSSAQIDQAVEVAKKVDYVVLVMGLDQSEEREERDRVHLDLPGKQLELINGVAEASKKPVILVLLSGGPLDITSAKYNHKIGGILWAGYPGELGGIALAQIIFGDHNPGGRLPTTWYPKDYIKVPMTDMRMRADPSTGYPGRTYRFYKGPKVYEFGYGLSYSKYSYEFVSVTHDKLHFNQSSTHLMVENSETISYKLVSELDEQTCQSMSLSVTVRVQNHGSMVGKHPVLLFIRPKRQKSGSPVKQLVGFESVMLDAGEMAHVEFEVSPCEHLSRANEAGAMIIEEGSHMLLVDDLEHPIDIYV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00939 772 Pfam Fibronectin type III-like domain 697 761 IPR026891 -
Gma06g00939 772 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 397 632 IPR036881 GO:0004553|GO:0005975
Gma06g00939 772 Gene3D - 50 370 IPR036962 GO:0004553|GO:0005975
Gma06g00939 772 SUPERFAMILY (Trans)glycosidases 38 395 IPR017853 -
Gma06g00939 772 PANTHER SUGAR HYDROLASE-RELATED 6 770 IPR044993 GO:0009044|GO:0045493
Gma06g00939 772 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 6 770 - -
Gma06g00939 772 Pfam Glycosyl hydrolase family 3 C-terminal domain 397 629 IPR002772 GO:0004553|GO:0005975
Gma06g00939 772 Pfam Glycosyl hydrolase family 3 N terminal domain 106 353 IPR001764 GO:0004553|GO:0005975
Gma06g00939 772 PRINTS Glycosyl hydrolase family 3 signature 113 132 IPR001764 GO:0004553|GO:0005975
Gma06g00939 772 PRINTS Glycosyl hydrolase family 3 signature 203 219 IPR001764 GO:0004553|GO:0005975
Gma06g00939 772 PRINTS Glycosyl hydrolase family 3 signature 277 295 IPR001764 GO:0004553|GO:0005975
Gma06g00939 772 Gene3D Immunoglobulins 657 771 IPR013783 -
Gma06g00939 772 SMART Fn3_like_2 695 765 IPR026891 -
Gma06g00939 772 Gene3D - 382 630 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00939 Gma-Chr6 8697413 8701206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00939 17 772 Glycoside Hydrolase AT1G78060 64.482 0.0 1005
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00939 - - gmx:100801565 1537.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00939 06 8697413 8701206 Gma06g00939 06 8697413 8701206 ECH
Gma14g01708 14 46368591 46376592 Gma06g00939 06 8697413 8701206 PCT
Gma06g00939 06 8697413 8701206 Gma14g01708 14 46368591 46376592 PCT