Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00925 ATGGCCGGTGGGGTGGTTCCTGTCGATTCATCACCATTAGCCAATGGCTTTGCTGGCAAGATAACGCTCTCAGTTATCATCACTTGCATCGTTGCTGCATCCGGTGGACTCCTTTTTGGATATGACATCGGAATTTCAGGAGGTGTCACAACAATGGTACCATTTCTGGAAAAATTCTTTCCAGCTATATTAAGAAAGGCTGCTAGCACTGAAGTAAACATGTACTGTGTGTATGACAGTCAAGTCTTAACATTGTTTACATCTTCTCTGTACCTTGCCGGATTAGTGTCATCTCTTGCCGCTAGTCGAGTCACGGCGGTATTGGGTCGGAGAAACACCATCATCTTGGGTGGTGTCATCTTTGTTGTTGGTGGTGCCCTTAATGGAGGTGCTGAAAATATTGCTATGCTCATTTTGGGCCGTATCCTACTCGGGTTTGGAGTTGGTTTCACTAATCAAGCTGCGCCGTTGTACCTCTCTGAAATCGCACCACCAAAATGGCGAGGAGCTTTCAACACAGGCTTCCAATTCTTCCTATCACTTGGAGTGCTGGTTGCAGGTTGCATCAACTTCGGAACCGCGAAGAAAACTTGGGGGTGGCGTGTCTCTCTCGGCCTTGCAGTGGTGCCTGCAGCAGTTATGACAATCGGTGCCTTCCTCATAACCGACACTCCCAACAGCTTGGTTGAGCGTGGCAAAATAGAGCAAGCCAGAAAAGCCCTACGCAAAGCAAGAGGATCCTCCATCGATGTTGAACCCGAATTGGAAGAACTCATTAAGTGGTCGCAAATTGCAAAATCCGTGGAGCAGGAACCCTTCAAGACCATATTTGAGAGGCAGTATCGACCCCACTTGGTCATGGCAATTGCTATCCCATTTTTTCAGCAAATGACAGGGATTAACATCGTCGCATTCTATGCTCCTAACCTCTTTCAATCAGTGGGTTTAGGGCACGATGCCGCTTTACTTTCCGCCATTATACTCGGAGCAGTCAACCTTGTTTCTCTCCTCGTCTCCACTGCTATTGTTGATCGCTTTGGTCGAAGGTTCTTGTTCGTAACTGGTGGCATATGCATGTTTATTTGCCAGATTGCGGTGTCAATTTTGCTAGCAGTGGTGACTGGTGTTCATGagacaaaAGGAATTCCTTTGGAGTCAATGTACACCATATGGGGTAAACACTGGTTTTGGCGGCGGTTTGTTAAAGGAGAAGTTGCACAAGAAAATCTTCCCTGA 1236 0.4684 MAGGVVPVDSSPLANGFAGKITLSVIITCIVAASGGLLFGYDIGISGGVTTMVPFLEKFFPAILRKAASTEVNMYCVYDSQVLTLFTSSLYLAGLVSSLAASRVTAVLGRRNTIILGGVIFVVGGALNGGAENIAMLILGRILLGFGVGFTNQAAPLYLSEIAPPKWRGAFNTGFQFFLSLGVLVAGCINFGTAKKTWGWRVSLGLAVVPAAVMTIGAFLITDTPNSLVERGKIEQARKALRKARGSSIDVEPELEELIKWSQIAKSVEQEPFKTIFERQYRPHLVMAIAIPFFQQMTGINIVAFYAPNLFQSVGLGHDAALLSAIILGAVNLVSLLVSTAIVDRFGRRFLFVTGGICMFICQIAVSILLAVVTGVHETKGIPLESMYTIWGKHWFWRRFVKGEVAQENLP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00925 411 Gene3D MFS general substrate transporter like domains 14 390 IPR036259 -
Gma06g00925 411 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 411 IPR020846 GO:0022857
Gma06g00925 411 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 371 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma06g00925 411 CDD MFS_STP 31 379 IPR044778 GO:0015145|GO:0015749
Gma06g00925 411 Pfam Sugar (and other) transporter 29 378 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma06g00925 411 SUPERFAMILY MFS general substrate transporter 29 368 IPR036259 -
Gma06g00925 411 ProSitePatterns Sugar transport proteins signature 2. 143 168 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma06g00925 411 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 377 404 - -
Gma06g00925 411 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 3 380 - -
Gma06g00925 411 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 377 404 IPR045262 GO:0015144
Gma06g00925 411 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 3 380 IPR045262 GO:0015144
Gma06g00925 411 PRINTS Sugar transporter signature 138 157 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma06g00925 411 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma06g00925 411 PRINTS Sugar transporter signature 36 46 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00925 Gma-Chr6 8543928 8549166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00925 372 402 Organic Solute Cotransporters AT1G34580 58.065 9.17e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00925 K24193 - gmx:100799418 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00925 06 8543928 8549166 Gma06g00925 06 8543928 8549166 ECH
Gma04g00945 04 9639324 9644140 Gma06g00925 06 8543928 8549166 GST