Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00896 ATGGCGCTTACTTTCGAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCGAGGTTGAGACTCCCTCATTTTGTGTGCCAAACTCCGTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGCATTGACAAATAGCCAGCTTGAGGATATTGGTTGCCAAATAATACTTGGAAATACATATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTTCATAATTTTATGAATTGGAAACGGGCTCTGCTTACAGACTCTGGTGGCTTTCAAATGGTTTCACTGTTGCATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTAGATGGAAAACCAATGCTTCTAACACCTGAGGAATCGATTCAAATCCAAAACCGAATTGGAGCAGATATCATTATGGCTCTCGATGATGTTGTAAAGACCACCATTACTGGTCCACGAATAGAGGAAGCCATGTATCGAACTCTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATCGTGCAAGGTGGTTTAGATCCCATATTGAGGGATATCTGTGTCAAAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGACAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGATTGTGTGTATCCTACCCGCACAGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTATTGAAACTAAAACACAAAGCAATGGCTGATGACACCCGTCCAATTGATCCTACTTGCCCTTGTATGGTTTGCAAGACCTACAGCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGGTCTCAACTTTTGTCATATCATAATTTATACTACATGTTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTTCCAGAATTTGTATGCGACTTTCTACGCAAAATGTTCCCGAAAGGTGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCAGTTTTCATCATGCCAAGAACATGATTCCAAAAGTATGCCCGAAGAAGAAGTTAGTTTAGTGAGGTAA 1242 0.4348 MALTFEVLGRFNRARAARLRLPHFVCQTPLFMPVGTQGTIKALTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWKRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHKAMADDTRPIDPTCPCMVCKTYSRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLRKMFPKGDVPEWVCDAMEVAGIDISSCCAQFSSCQEHDSKSMPEEEVSLVR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00896 413 Gene3D - 1 367 IPR036511 GO:0006400|GO:0016763
Gma06g00896 413 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 1 389 - -
Gma06g00896 413 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 5 365 IPR002616 GO:0006400|GO:0016763
Gma06g00896 413 SUPERFAMILY tRNA-guanine transglycosylase 1 364 IPR036511 GO:0006400|GO:0016763
Gma06g00896 413 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 5 365 IPR004803 GO:0008479|GO:0101030
Gma06g00896 413 Hamap Queuine tRNA-ribosyltransferase [tgt]. 3 364 IPR004803 GO:0008479|GO:0101030
Gma06g00896 413 Pfam Queuine tRNA-ribosyltransferase 13 365 IPR002616 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00896 Gma-Chr6 8261771 8270334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00896 K00777 - gmx:100806874 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00896 06 8261771 8270334 Gma06g00896 06 8261771 8270334 ECH
Gma04g00910 04 9168514 9175984 Gma06g00896 06 8261771 8270334 GST