Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00879 ATGTCTTCCCATTCGCACAAAGGCACCTCCTTCTACGGCGATGCCGCCCCTTATCGATCCAGAGAGGGGCTTAGCACTCGACCCGTTGCATCCTCCGATGAAATCCAATTGCACATCGATCCCGGCATCGACTTCGACGACGAAATCACCGGTCTTCGTGGCCAAGTTAAAAAATTGAAAAATgttgctgaagagataggttcagaagtcaagtttcaaagagattttctggaacaAGTGCAAATGGTAATGATACAAGCTCAAGCTGGGGTCAAGAATAACTTAAGAAGATTGAACAAGAGCATCGTCAAAAATGGTTCCAACAATATTGTTCATGTGATTGCTTTTGCATTAGTCTGTTTCTTTATAGTATACTTCTGGTCAAAGATGTCCAGAAAATGA 402 0.3781 MSSHSHKGTSFYGDAAPYRSREGLSTRPVASSDEIQLHIDPGIDFDDEITGLRGQVKKLKNVAEEIGSEVKFQRDFLEQVQMVMIQAQAGVKNNLRRLNKSIVKNGSNNIVHVIAFALVCFFIVYFWSKMSRK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00879 133 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 46 101 IPR000727 -
Gma06g00879 133 Gene3D - 46 108 - -
Gma06g00879 133 PANTHER GOLGI SNARE BET1-RELATED 9 132 IPR039897 GO:0015031|GO:0030173
Gma06g00879 133 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 132 - -
Gma06g00879 133 CDD SNARE_Qc 46 100 - -
Gma06g00879 133 SUPERFAMILY SNARE fusion complex 44 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00879 Gma-Chr6 8142319 8145998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00879 K08505 - gmx:100787783 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00879 06 8142319 8145998 Gma06g00879 06 8142319 8145998 ECH