Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00844 ATGAAGCAAATCGACGACGGCGATGACGAGCAGCGATCCCTCTCCCCTCTGCCGGAACAGGTCCTGGAGAACGTCCTGGAAAGCGTGCTCCACTTCCTCACCTCCCGTCGCGACCGCAACGCCGCCTCACTGGTCTGCAAGTCCTGGTACCGCGCCGAGGCCCTCACCCGCCCCGACCTCTTCATCGGCAACTGCTACGCCGTTTCCCCCCGGCGCGCCACCGCCCGCTTCCCCCGCGTCCGGTCCCTGACCATCAAGGGCAAGCCCCGCTTCGCCGACTTCGACCTCATGCCCCTGAACTGGGGGGCCCACTTCACCCCCTGGGCCACCGCACTCTCCCAATCTTACCCTTCCTCCCTCAACAAACTCCACCTCAAACGCATGTCCCTCACCGACCACGACCTCATCCTCCTCTCCCACTCCTTCCCCTCCTTCCAAGACCTCGTTCTCACGTGCTGCGAAGGCTTCGGCACCACCGGCCTCGCCGCCCTCACCTCCAACTGCAGATTGCTGAGAGTGCTTGAACTAGTGGAATGCGTGGTTGAGGTTGGCGACGAGGAAATGGATTGGATATCGTGTTTTCCGGAGAGTGATGCTCAGACACATTTGGAATCTCTTGTTTTTGACTGCGTGGAGTGTCCCGTTAATTTCGATGCTTTGGAGAGGCTGGTGGCGCGGTCTCCCTTGTTGAGGAAGCTGAGGCTGAATCGTTATGTTTCGATGTCTCAGCTGCACCGGTTGATGCATCGAGCGCCGCAGCTGACGCATCTGGGAACTGGATCCTTCAGTGCTTCGGAGCTGGATCAGGAACTGGATTTTGCGTCTGCCTTCGCCTCTTGTAAATCGTTGGTTTGTTTGTCTGGGTTTAGGGAGTTTTGGGCGGATTATCTCCCTGCTATTTATCCAGCTTGTGCCAATCTCATATCCTTGAATTTCAGTTTTGCTGATATCAGTGCGGATCAGCTCAAATCGGTTATACGGCACTGTCATAAGCTACAGACCTTTTGGGTCCTAGATACCATATGCGATGAAGGGCTTCAAGCGGTGGCTGAGACTTGCAAGGATTTGCGTGAGCTTCGGGTTTTCCCTGTCAATACCAGGGAGGAGATAGAAGGTCCCGTGTCTGAGGTGGGATTTGAGGCGATTTCTCGAGGTTGTAGGAAACTGCAGTCGATTCTGTTTTTCTGCCAGAGGATGACGAATGCTGCTGTGGTGGCCATGTCAAACAACTGCCCGGATCTTGTGGTGTTTCGGTTGTGTATAATTGGGCAGTATCGGCCGGACCCTGTGACACTAGAACCCATGGATGAGGGTTTTGGTGCCATTGTTATGAACTGCAAGAAGCTCACTCGGCTTGCTGTGTCTGGTTTGCTGACTGACCGGGCTTTTAGTTACATTGGGACGTATGGGAAGTTGATTAGGACGCTGTCAGTTGCCTTTGCTGGAGACACTGACCTTGGACTCCAATATGTTCTACAAGGATGTCCTAATCTGCAGAAGCTTGAAATCAGAGACAGTCCATTTGGGGATGGAGCTTTGCATTCTGGCTTGCATCACTTTTACAACATGAGGTTCCTCTGGATGTCCTCATGTAAGTTGACGCGCCAAGCTTGCCAAGAAGTTGCGCAGACATTGCCCCATCTGGTGTTGGAAGTCATTAATAGTGAAGAGGACAAAGCTGATGGTATAGAGATTCTGTACATGTATCGGTCTCTGGACGGGCCACGGGATGATGCTCCAAAAGTTGTTACCATCCTTTGCTGA 1764 0.5363 MKQIDDGDDEQRSLSPLPEQVLENVLESVLHFLTSRRDRNAASLVCKSWYRAEALTRPDLFIGNCYAVSPRRATARFPRVRSLTIKGKPRFADFDLMPLNWGAHFTPWATALSQSYPSSLNKLHLKRMSLTDHDLILLSHSFPSFQDLVLTCCEGFGTTGLAALTSNCRLLRVLELVECVVEVGDEEMDWISCFPESDAQTHLESLVFDCVECPVNFDALERLVARSPLLRKLRLNRYVSMSQLHRLMHRAPQLTHLGTGSFSASELDQELDFASAFASCKSLVCLSGFREFWADYLPAIYPACANLISLNFSFADISADQLKSVIRHCHKLQTFWVLDTICDEGLQAVAETCKDLRELRVFPVNTREEIEGPVSEVGFEAISRGCRKLQSILFFCQRMTNAAVVAMSNNCPDLVVFRLCIIGQYRPDPVTLEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFSYIGTYGKLIRTLSVAFAGDTDLGLQYVLQGCPNLQKLEIRDSPFGDGALHSGLHHFYNMRFLWMSSCKLTRQACQEVAQTLPHLVLEVINSEEDKADGIEILYMYRSLDGPRDDAPKVVTILC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00844 587 Pfam F-box 19 57 IPR041567 -
Gma06g00844 587 Gene3D Ribonuclease Inhibitor 59 586 IPR032675 -
Gma06g00844 587 Pfam Transport inhibitor response 1 protein domain 78 125 IPR041101 -
Gma06g00844 587 SMART LRR_CC_2 446 469 IPR006553 -
Gma06g00844 587 SMART LRR_CC_2 117 141 IPR006553 -
Gma06g00844 587 SMART LRR_CC_2 386 410 IPR006553 -
Gma06g00844 587 SMART LRR_CC_2 142 167 IPR006553 -
Gma06g00844 587 Gene3D - 5 57 - -
Gma06g00844 587 SUPERFAMILY RNI-like 115 552 - -
Gma06g00844 587 SUPERFAMILY F-box domain 13 52 IPR036047 GO:0005515
Gma06g00844 587 PANTHER F-BOX PROTEIN FBX14 12 585 - -
Gma06g00844 587 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 12 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00844 Gma-Chr6 7789542 7792275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00844 - - gmx:100776213 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00844 06 7789542 7792275 Gma06g00844 06 7789542 7792275 ECH