Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00739 ATGGCATCTATTAGAAGAACCTTGTCTCCTGTGCCTAGAGTTGGAACTGTAGCAAATGGAGAAGTGTGTTCAGTAGCTTCTCCATTGTCGAAGTCCTCGTCGAGTCCCCAGAACTTCTCACCGTCAGTTGGATTGGACTACCGTGCACTTGTGTTTGGTGTTTTCTCCCCGAGGTCTTTTTGGGCTCTTGAGAGATCAAAGCCAAGGGGGCAGCTTTGGAGGAAGGTGCTTTTCCATTTTTTCATTTGTTTCATTGTTGGTGTTTCTATGGGACTCATCCCACTTGCATCAACACACATGTCCTCAAATATCATGCCAAAACAACAAGCCTTCTCCTTTGAGATGATATCTGCTGTGGGGAATTTCCAGCCATTTGAGAATGTAAAGATAAATGTGACGCCATCGATCGATAAGGCTGTGAATTTTAATGCTACTTTTTATTCAACTGTGAAAGAACAGGAACTAATAGATGGAGTAGCATATAATGTCTCAGATAGCCAAATCAGTGAAAATCCATCTTTGGAGTCTCAGAAGCTTCTCATAATTGTGACCCCAACATACAATCATCTATTTCAAGCATATTACTTGCATCGCTTGTCTCAGACATTAAAATTGGTCCCACCTCCCTTGTTGTGGATTGTTGTTGAGATGACTTCTCAATCTGAAGAAACTGCTGACATCTTAAGGAGTAGTGGGATTATGTACAGGCATCTCGTTTGTAAAACAAATCTAACCAACCCAAGCCATAGGAGCATTCTTCAAAGAAATGTTGCAATGGCTCACATTGAAATTCATCGTCTTGATGGAATTGTTTACTTTGCAGATGATGATAACATCTACTCATTGGACCTCTTTCAGCAAATGAGAGAAACAAGGCGATTTGGAACATGGACTGTAGCAAGATTATCAGGGGATAAAAGTAGCATTGTCTTGCAAGGGCCCATTTGTAATGGAAGTCGAGTAATTGGATGGCATACAAATGAATCAAATGGGAAATCTAAAAGATTTCATGCTGAAATGCCAGGTTTTTCCTTCAATAGTACAATACTATGGGATCCAAAGAGGTGGCATCGCCCCACTCTTGAACCTATCAGGCAACTTGACTCGGTCAAGGAAAGTTTGTGGGTTAGCACATTGATTGAGCAGGTGGTTGAAGATGAAAGTCAAATGGAGGGCTTAATGCACAACTGCTCGAGAGTTATGATGCAGAAGTGGAGAGCAGTAAATTTTCATCCTGATTGGAAGATTATAAAGAATTGGAGGTCGCCTGCTAATGCTGTTATTTATCTTTACATGCTCCAGTGCCTACTCGGATATTCCATTTAA 1326 0.411 MASIRRTLSPVPRVGTVANGEVCSVASPLSKSSSSPQNFSPSVGLDYRALVFGVFSPRSFWALERSKPRGQLWRKVLFHFFICFIVGVSMGLIPLASTHMSSNIMPKQQAFSFEMISAVGNFQPFENVKINVTPSIDKAVNFNATFYSTVKEQELIDGVAYNVSDSQISENPSLESQKLLIIVTPTYNHLFQAYYLHRLSQTLKLVPPPLLWIVVEMTSQSEETADILRSSGIMYRHLVCKTNLTNPSHRSILQRNVAMAHIEIHRLDGIVYFADDDNIYSLDLFQQMRETRRFGTWTVARLSGDKSSIVLQGPICNGSRVIGWHTNESNGKSKRFHAEMPGFSFNSTILWDPKRWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMHNCSRVMMQKWRAVNFHPDWKIIKNWRSPANAVIYLYMLQCLLGYSI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00739 441 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 179 420 IPR029044 -
Gma06g00739 441 SUPERFAMILY Nucleotide-diphospho-sugar transferases 179 402 IPR029044 -
Gma06g00739 441 CDD GlcAT-I 178 401 IPR005027 GO:0015018|GO:0016020
Gma06g00739 441 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 406 IPR005027 GO:0015018|GO:0016020
Gma06g00739 441 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 406 - -
Gma06g00739 441 Pfam Glycosyltransferase family 43 199 403 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00739 Gma-Chr6 6716420 6720015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00739 1 401 Glycosyltransferase AT1G27600 45.522 4.46e-113 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00739 K20869 - gmx:100790621 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00739 06 6716420 6720015 Gma06g00739 06 6716420 6720015 ECH
Gma04g00750 04 7036176 7040029 Gma06g00739 06 6716420 6720015 GST