Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00719 ATGGTCCTTCTATACCTCCCAAGGTTTCCTCTCTACCTCGTTACCTTATCTCACTCCCTCCCTCGTCGAACCTACTCCAAAACCACCCTCTTACGCCCACCCAAATCCACTCTCACAACCTCACAACCCTTAACCGTTAACCCTTCCCCCACAGAGCTATCCCTCGAGAAGCTCTTCGTTCCGCCGGAGACCACCGTGTCCCTCGAAAGTTCAAGAGTCTTGAACGGTTCTAACATTCTGCTGAGTAACTACGCCAACGATGCTCAGGTATTGCAGGCCGAGTTTGTGAAAAGCAGTGTGAAGACTGAAGACTGTCCCTCCGATGGAATTCCCGAGTTCGCTCTCGTTGGCCGCTCCAACGTCGGCAAATCCTCGCTCCTTAATTCCCTCGTCCGCCGCAAGAAACTCGCCTTAACTTCGAAGAAACCCGGCAAAACACAATGTATAAACCATTTTCGGATTAATAATAGCTGGTACCTGGTTGATTTGCCTGGTTATGGGTATGCATCTGCACCACATGAACTTAGGATGGATTGGGAAAAATTCACCAAGGACTATTTCCTTAACCGCTCAACCTTAGTTTCAGTATTCCTTCTAATAGATGCTAGCATTCCTGCTAAACAAATTGATCTTGACTATGCCAGTTGGTTGGGTCAGAATCAGATCCCAATGACATTAATCTTCACCAAATGTGACAAGCGGAAAAAGAAAAAGAATGGAGGCAAAAGACCAGAAGACAATGTTAATGATTTTCAGGATTTGATTCGAGTTAGAGCAGATACGCTTTTCCAGATAGACTTGCTTGATTACCAGCTAATATGGTTATCAATTTATCTATTTTCCATGCTAGAGACCGGAGAGAATCCAAATTGCATTTCATCAGGCGCCATCCTTTTCCTGCTGAGAGTGAGAGGCGTTAATCTGAATGGGTTACATCCACCATGGAAGAACCGGTCTCAGGCACTTATTCAGATTCAGAACCGCCACCGGCGTGGCGACAAATTCCTGCACGAAATTACCGCGGAGGTGGAGAAAGACAGGCGCAGGGAGCGAAACGAGCGTTTGCGCCTCGGCCTCGACACCGCCGACATCGACGCCGAGTCGGAGCAGGACTACATGGGCGTGGGGCCCCTCATCGCGAAGCTCGAGAAGGAAATGCTCAAGGAATCTGCTGAGCTGAACCGCTACGAGGAGCCCACCGACTCCGAGGACGACTCCGACGAGGAAACCATGGACGACGCCGACAAGAAGGTGAGTGATTTCGAGAAGAAAAAAGACAAGCACATGGACCTTCTCGATAAATTCACCTCAGCCGAAACCCTAGACGACGCGTTTAAGTGGATGGCCAAAATAGATAACTTCGAAAACAAGCATTTCCGCCTGAGGCCTGAGTATAGGGTTATTGGTGAGCTCATGAATCGGCTTAAGGTCGCGACAGAGCTGAAGGACAAGTTTGTTTTGCAGAACAAGCTTAATAGGGCGTTGAGGTTGGTGCGGTGGAAGGAGGCTTATGATCCTGATAACCCTGCCAATTATGGCGTGATTCAGCGCGAGCAGCCAACCGCAGACGCGAAGGAAGAGGCTGAGTTCGAGAAGGAGAAGCAGAAGCAGATTGAGGAGGGAGATAATGCTGATGATGAGGAGGAGCAGGAGTTTGATGACATGAAGGAGAAGGATAATGTACTGATGGCCAAACTTGAGGCTATCGATAGGAAGCTCGAGGAGAAGTTGGCGGAGCTCGAGTATACATTTGGGAGGAAGGGGAAGGCGCTCGAGGAAGAGATCAAGGATCTCGCTGAGGAGAGAAATGAATTGACTGAGCAGAAGAGAAAGCCACTTTACCGGAAGGGTTTTGATACAAGATTGATAGACATGAACCGAACTTGTAAAGTCACAAAGGGAGGACAAGTTGTGAAGTATACTGCCATGGTAGCTTGTGGCAACTATAATGGCGTCATTGGTTTTGCAAAAGCCAAAGGCCCTGCAGTCCCAGTTGCCCTTCAAAAGGCGTATGAGAAATGCTTCCAGAATTTGCATTATGTAGAGCGACATGAGGAGCATACAATTGCACATGCAGTACAAACGTCTTATAAAAAGACCAAGGTAGTTTATCTCTGGCCCGCTCCTACTACAACTGGCATGAAAGCCGGCAGATCAGTCGAAGCCATACTGCATTTAGCTGGTTTGAAGAATGTCAAATCAAAGGTCATTGGTTCCAGAAATCCTCATAATACAGTTAAAGCTGTCTTCAAAGCACTGAATGCGATTGAAACGCCAAGGGATGTCCAAGAGAAGTTTGGCAGGACTGTGGTTGAGAAGTATCTCTTGTGA 2331 0.4788 MVLLYLPRFPLYLVTLSHSLPRRTYSKTTLLRPPKSTLTTSQPLTVNPSPTELSLEKLFVPPETTVSLESSRVLNGSNILLSNYANDAQVLQAEFVKSSVKTEDCPSDGIPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPHELRMDWEKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQDLIRVRADTLFQIDLLDYQLIWLSIYLFSMLETGENPNCISSGAILFLLRVRGVNLNGLHPPWKNRSQALIQIQNRHRRGDKFLHEITAEVEKDRRRERNERLRLGLDTADIDAESEQDYMGVGPLIAKLEKEMLKESAELNRYEEPTDSEDDSDEETMDDADKKVSDFEKKKDKHMDLLDKFTSAETLDDAFKWMAKIDNFENKHFRLRPEYRVIGELMNRLKVATELKDKFVLQNKLNRALRLVRWKEAYDPDNPANYGVIQREQPTADAKEEAEFEKEKQKQIEEGDNADDEEEQEFDDMKEKDNVLMAKLEAIDRKLEEKLAELEYTFGRKGKALEEEIKDLAEERNELTEQKRKPLYRKGFDTRLIDMNRTCKVTKGGQVVKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAHAVQTSYKKTKVVYLWPAPTTTGMKAGRSVEAILHLAGLKNVKSKVIGSRNPHNTVKAVFKALNAIETPRDVQEKFGRTVVEKYLL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00719 776 Pfam 50S ribosome-binding GTPase 113 230 IPR006073 GO:0005525
Gma06g00719 776 Gene3D - 85 273 IPR027417 -
Gma06g00719 776 Gene3D - 683 773 IPR014721 -
Gma06g00719 776 ProSiteProfiles S5 double stranded RNA-binding domain profile. 618 681 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma06g00719 776 PANTHER 28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL 327 776 - -
Gma06g00719 776 MobiDBLite consensus disorder prediction 519 556 - -
Gma06g00719 776 MobiDBLite consensus disorder prediction 391 418 - -
Gma06g00719 776 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 109 278 IPR030393 GO:0005525
Gma06g00719 776 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 93 239 IPR019987 GO:0005525
Gma06g00719 776 Gene3D - 569 679 - -
Gma06g00719 776 MobiDBLite consensus disorder prediction 520 541 - -
Gma06g00719 776 Pfam Ribosomal protein S5, C-terminal domain 702 765 IPR005324 GO:0003735|GO:0005840|GO:0006412
Gma06g00719 776 SUPERFAMILY dsRNA-binding domain-like 613 683 - -
Gma06g00719 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 237 IPR027417 -
Gma06g00719 776 SUPERFAMILY Ribosomal protein S5 domain 2-like 687 766 IPR020568 -
Gma06g00719 776 Coils Coil 588 611 - -
Gma06g00719 776 Coils Coil 563 583 - -
Gma06g00719 776 Hamap Probable GTP-binding protein EngB [engB]. 98 259 IPR019987 GO:0005525
Gma06g00719 776 Pfam Ribosomal protein S5, N-terminal domain 618 682 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gma06g00719 776 CDD YihA_EngB 112 229 IPR030393 GO:0005525
Gma06g00719 776 PANTHER RIBOSOMAL S SUBUNIT 327 776 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00719 Gma-Chr6 6521451 6530613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00719 K02988 - gmx:100809192 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00719 06 6521451 6530613 Gma06g00719 06 6521451 6530613 ECH
Gma04g00730 04 6812788 6816641 Gma06g00719 06 6521451 6530613 GST