Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00716 ATGGAGTATCGTCTCCTACCCATTTTTACTTTACTCAATCTTGCACTGGTGGCAATCCATGCTGCTTTACCTCCTGAAGTTTACTGGAAGTCGGTGCTTCCTACTACGCCAATGCCAAAAGCCATCACTGATATCCTTTACCCCGATTGGGTGGAAGAGAAAAGTACCTCAGTGAATGTTGGAGGCAAGGGCGTAAACGTGCATGCAGGAAAAGGAGGAGGTGGCACCAATGTCAACGTTGGTGGAAAAGGATCAGGCGGAGGCGTGAACGTGCATGCAGGTCACAAGGGAAAGCCAGTGCATGTTTCTGTTGGCTCAAAGTCTCCATTCAATTACATCTACGCTTCAACGGAGACTCAATTACACGATGACCCCAACGTCGCACTCTTCTTCTTGGAAAAGGACTTGCATCCCGGAACAAAGTTGAACTTGCACTTCACCACCAGTTCCAATATTCAAGCCACATTCTTGCCACGCCAAGTTGCGGATTCTATACCCTTTTCATCCAGCAAGGTGGAGGTTGTATTCAACAAGTTTTCCGTAAAACCCGGGTCAGAGGAGGCCCAGATCATGAAGAATACTCTCAGTGAGTGTGAAGAGGGTGGCATCAAAGGAGAGGAAAAGTACTGTGCCACTTCGCTTGAATCCATGATTGATTTCAGCACTTCCAAGCTTGGAAAAAATGTTGAGGTTGTGTCCACGGAAGTAGTGGAGGACAAGGAAACGGGATTGCAGAAATACACCGTAGCACCGGGAGTGAACAAGTTATCAGGGGACAAGGCTGTTGTGTGCCACAAGCAGAACTACCCTTATGCTGTTTTTTACTGTCACAAAACTGAGACCACAAGAGCTTACTCTGTGCCTTTGGAGGGTGCTAATGGGGTTAGGGTTAAAGCGGTAGCAGTGTGCCACACTCACACGTCGGAATGGAACCCTAAACATTTGGCCTTTCAAGTGCTCAAAGTTAAGCCAGGAACCGTTCCTGTCTGCCACTTCCTACCTGAGGATCATGTTGTTTGGGTTCCCAAGGTTCTGCTGAGTTGCTGTCTGATCGCGTTTCATCGCGCTCACCGTCACCGGCAAGGTGACTACACACAGGGACTCCAGTTAAATGCCATACACGATGACCCTAGAACATTGAAAATCTTCCACTCTCTCGTGTCCAGTGATACGATACGGCGAGGAATCTTGATACGTCAAAACATGGTAGAAGCAGGGGAAGAGGAGGTTATTGAATTCAAGTGGGGCACAAGGAAAGGGTTGGGTGGCAAAAAGAAGGATGTGCAGTTTTACGAATCGTTCACCTACGATGGTGTGGAATACTCCCTCTTTGATTCCGTGTTTCTCTACAAGGAAGGTGAACCCGAGCATTACATTGGTAAAATCCTTAAGATATGGGAGAACTCTGATAAGAGCAAGAAAGTTAAGATTCTATGGTATTTTAGACCTTCTGAGATTTTGAATTTCTTGGAAGGGAGTGAGACACTTGAGAATGAGTTGTTTCTGGCTTCTGGTGAAGGCGAAGGGCTTGTAAATGTCAATCCTCTGGAAGCTATTTCTGGCAAATGCAATATTGTTTGCATTTCGAAGGATATCAGGAATCCATATCCATCAGATGAAGAAGTTCAAATGGCTGAATTTGTATTCTATCGTTTCTTTGATGTTGGGATGCGTAAAATATTGGACAAGATAGTAGTTGATAAAATTGCTGGAATTGAAGTTAAAAATATTTTTAACAATTTAGATAGTCAAAAGGTTGTTGGTCTTGTGAAACCTGATTTAGACAACAAAGAAGTTAGCGGGAACTTCATGGCAAGTAATGAAGTGGTGGCTCTTTCGAGCCAAAAAAAAAGTCAACCTTTGATTGAAAAACCAGATGGGAAGTGTTTTGACACATTAGTTAGAGAAAATGCTGCTTCTAAGTCATTATTGGGAGAAAAACCTACTTGTAGCATTGGTGTAAAGGAAGCAAGTAAATCTGCTAATGCTTTGCATACTATTTCCAACAAGAAGACTGTGCCTCAAGCCAAAGTTGAAGAAAAGAGGGGTTGTAAGGATTCTTTGGTTAAACAAAAATCATTTGCTAAACTATCACATGGTTTGATAGCTGGTTTGGAAATGAAGGAAATAACTAAAATGGATGATGGGAGTGGAAAGGGATCTATTGAGAAGAACATTTTGATGTCTAGGGGTGATTCAAAAAGGGATGATCGCAAGGATGTTGGTGTCCCGATTGGACAAATTAAAAAGGGATTAGAGGAGGAAAATGCTTCCAAGAAGGGAAAACGTGGTGGCTTTGGTAAGGTTTCTAGTTTGAAGAAGAATAATAACGGGCAAAATCGAAGGCTTATTACCTATGACGATGACAACAATGATGATTTGAAGACTATAGCTCCATGTTCATCAAAGGAGAAATATAAGGTTCAACGGGCAATGGATTCTTGTGATGTGGAGGAACTCCCTTCCAAGAAGTTAAAGATTGACAAGAAGCTAGCGAAACTCACTAGTGACAAGTTGCGCAAAGAATCTTCAATGATTTCACCGAATGTGGAACACAAGCTAGATTTTCGTCCAATGGAAGTTACTCGAAGACCAAATGATGAGGATAGAAGCAAATGGTTTAAGGAAATTCCTTGGGAAGAAAAAATGAAAACTGCTTATGAGCAAGGAAGGCTTGTGCTACTTCAAAACTTAGATCCATCTTTATCTTCATCCGAGGTACAGAATATTATTTGGACTGGATTTAAAGAAAGTTGCACAGCAAGGATGATCCAGAAAACTGCCTACTCCAGCCCTCATTCTGGTCAAGCTTTTGTTATATTTAAAAAAAGTGAAGCAGCAGAGTCGGTTGTTAGAAAGTTAGATGAGGGCTGTCTCTTAATGTCAAATGGGCGACCCCTTGTTGCAAGCAGTGGAGTTCCTTGCTTTCCAAAAAAGAAGCCAATATTTTATGGTCATCATGTTGTCGATCAACTTCGGATGATGCAAATGCAACGAGAGATAAAAGATGTTGTATCTACTTCACATTGTTCTCAGCCCAACAATATTGAATATGATATGGGCATAGAGTGGTGCTTGCTGCAAGAAAGAGCAAACAAATCATGGAGAATGTTGTATCAGCAACAAGGTGAGGAGTTGAGTAAACTCAAAGCTAAGCTGAAGTCTAAAATTTAA 3174 0.4219 MEYRLLPIFTLLNLALVAIHAALPPEVYWKSVLPTTPMPKAITDILYPDWVEEKSTSVNVGGKGVNVHAGKGGGGTNVNVGGKGSGGGVNVHAGHKGKPVHVSVGSKSPFNYIYASTETQLHDDPNVALFFLEKDLHPGTKLNLHFTTSSNIQATFLPRQVADSIPFSSSKVEVVFNKFSVKPGSEEAQIMKNTLSECEEGGIKGEEKYCATSLESMIDFSTSKLGKNVEVVSTEVVEDKETGLQKYTVAPGVNKLSGDKAVVCHKQNYPYAVFYCHKTETTRAYSVPLEGANGVRVKAVAVCHTHTSEWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVPKVLLSCCLIAFHRAHRHRQGDYTQGLQLNAIHDDPRTLKIFHSLVSSDTIRRGILIRQNMVEAGEEEVIEFKWGTRKGLGGKKKDVQFYESFTYDGVEYSLFDSVFLYKEGEPEHYIGKILKIWENSDKSKKVKILWYFRPSEILNFLEGSETLENELFLASGEGEGLVNVNPLEAISGKCNIVCISKDIRNPYPSDEEVQMAEFVFYRFFDVGMRKILDKIVVDKIAGIEVKNIFNNLDSQKVVGLVKPDLDNKEVSGNFMASNEVVALSSQKKSQPLIEKPDGKCFDTLVRENAASKSLLGEKPTCSIGVKEASKSANALHTISNKKTVPQAKVEEKRGCKDSLVKQKSFAKLSHGLIAGLEMKEITKMDDGSGKGSIEKNILMSRGDSKRDDRKDVGVPIGQIKKGLEEENASKKGKRGGFGKVSSLKKNNNGQNRRLITYDDDNNDDLKTIAPCSSKEKYKVQRAMDSCDVEELPSKKLKIDKKLAKLTSDKLRKESSMISPNVEHKLDFRPMEVTRRPNDEDRSKWFKEIPWEEKMKTAYEQGRLVLLQNLDPSLSSSEVQNIIWTGFKESCTARMIQKTAYSSPHSGQAFVIFKKSEAAESVVRKLDEGCLLMSNGRPLVASSGVPCFPKKKPIFYGHHVVDQLRMMQMQREIKDVVSTSHCSQPNNIEYDMGIEWCLLQERANKSWRMLYQQQGEELSKLKAKLKSKI 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00716 1057 Coils Coil 1039 1057 - -
Gma06g00716 1057 Pfam BURP domain 129 342 IPR004873 -
Gma06g00716 1057 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 891 974 IPR000504 GO:0003723
Gma06g00716 1057 PANTHER PROTEIN ANTI-SILENCING 1 402 1055 - -
Gma06g00716 1057 ProSiteProfiles BAH domain profile. 439 564 IPR001025 GO:0003682
Gma06g00716 1057 MobiDBLite consensus disorder prediction 728 744 - -
Gma06g00716 1057 CDD RRM_SF 893 970 - -
Gma06g00716 1057 PANTHER PROTEIN ANTI-SILENCING 1 402 1055 - -
Gma06g00716 1057 Gene3D - 409 561 IPR043151 -
Gma06g00716 1057 MobiDBLite consensus disorder prediction 713 788 - -
Gma06g00716 1057 Gene3D - 874 971 IPR012677 -
Gma06g00716 1057 Pfam BAH domain 445 527 IPR001025 GO:0003682
Gma06g00716 1057 SMART BURP_2 128 343 IPR004873 -
Gma06g00716 1057 MobiDBLite consensus disorder prediction 770 784 - -
Gma06g00716 1057 SUPERFAMILY RNA-binding domain, RBD 883 970 IPR035979 GO:0003676
Gma06g00716 1057 ProSiteProfiles BURP domain profile. 130 343 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00716 Gma-Chr6 6461308 6483673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00716 - - gmx:100783899 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00716 06 6461308 6483673 Gma06g00716 06 6461308 6483673 ECH
Gma04g00727 04 6751474 6756330 Gma06g00716 06 6461308 6483673 GST