Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00704 ATGGGGATAGCAGAAGCATGCTCCAGATTCCTTGGTGACTTTTTACAAGCATTGAAATGCTCCTCAAAAAGCTCAGTGTCTCACCTTGATCATAATTATCATGACCCTTCTTCATGCAAGCCCCAGAATGTGCTCAAACTTGATGACAAGATGGTTGGTGCCCTTGTCAGTGTTTTTGGCATGGAAACCAATGGGAGAATCAAGAAGCTTGGTTTGATGTATGATAATAAGCCCTCATCATCATCAGGGTTTGAGCTAGCTGAGGGTGGCTTGCTTGATGATGAAGTGCCTGTGGAAGAGGTTCTTGGTGAGTTGGAGGACATGTCAAAACGCAGTGAGCTTTTGCATGAAGCCTTCAAGATCTTTGATGAGGATGGGGATGGATACATAGATGCAATGGAGTTGAAGAAGGTGCTTGATTGCTTGGGGTTGGACAAGGGTTGGGATATGAGTGCTATTGAGAAGATGGTCAAGGTTGCTGATTTGAACTTTGATGGCAAGGTTTATTTTGGTGAGTTTGAATTGATGATGGGGTAG 537 0.4395 MGIAEACSRFLGDFLQALKCSSKSSVSHLDHNYHDPSSCKPQNVLKLDDKMVGALVSVFGMETNGRIKKLGLMYDNKPSSSSGFELAEGGLLDDEVPVEEVLGELEDMSKRSELLHEAFKIFDEDGDGYIDAMELKKVLDCLGLDKGWDMSAIEKMVKVADLNFDGKVYFGEFELMMG 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00704 178 ProSiteProfiles EF-hand calcium-binding domain profile. 110 145 IPR002048 GO:0005509
Gma06g00704 178 CDD EFh 115 173 IPR002048 GO:0005509
Gma06g00704 178 Pfam EF-hand domain pair 114 177 IPR002048 GO:0005509
Gma06g00704 178 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 104 177 - -
Gma06g00704 178 Gene3D - 91 178 - -
Gma06g00704 178 ProSiteProfiles EF-hand calcium-binding domain profile. 148 178 IPR002048 GO:0005509
Gma06g00704 178 PANTHER CALCIUM-BINDING PROTEIN CML42 104 177 - -
Gma06g00704 178 ProSitePatterns EF-hand calcium-binding domain. 123 135 IPR018247 -
Gma06g00704 178 SMART efh_1 114 142 IPR002048 GO:0005509
Gma06g00704 178 SUPERFAMILY EF-hand 93 177 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00704 Gma-Chr6 6395060 6395596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00704 115 177 EF-hand Containing Proteins AT4G20780 55.556 5.61e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00704 - - gmx:100781375 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00716 04 6660495 6661306 Gma06g00704 06 6395060 6395596 GST