Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00676 ATGCAAGGCAAAGAAATGGAAGGGTTGTCGTCTTCATCGGCGATCGCGCAGAAAACATGGGAACTCGAGAACAACATCATCCCGATGGACACTCCGGGCGGCGCCGCTACCTCCTCCACCGCTACCACCACGACCAACGCCGACGACTCGATCTTCTACTACGACGAGGCGGGGCAGAACGAGTTCCAGCGCGACAAGCCCTGGGCCAACGACCCCCACTACTTCAAGCGCGTGAAGATCTCCGCACTCGCGCTCCTCAAGATGGTCGTCCACGCGCGCTCCGGCGGCACCATCGAGGTCATGGGCCTCATGCAGGGCAAGACCGACGCCGACGCCATCATCGTCATGGACGCCTTCGCCCTCCCAGTCGAAGGCACCGAGACTCGCGTCAATGCCCAGGCCGATGCCTACGAGTACATGGTCGATTATTCCCAGACCAACAAACAGGCTGGGCGGTTGGAGAATGTTGTGGGATGGTATCACTCTCATCCTGGTTACGGTTGCTGGCTGTCGGGGATCGATGTTTCGACGCAGATGCTGAATCAGCAGTTTCAAGAGCCGTTTCTAGCGGTTGTGATTGACCCGACGAGGACTGTTTCGGCGGGGAAGGTTGAGATTGGGGCTTTCAGGACTTATCCTGAAGGGTATAAGCCTCCGGATGAGCCTATTTCTGAGTACCAGACTATTCCTCTCAATAAGATTGAGGATTTTGGTGTTCACTGTAAACAGTATTATGCCTTGGATATTACTTACTTTAAGTCCTCTCTTGATTCACACCTCTTGGACCTGCTGTGGAACAAGTATTGGGTGAATACACTGTCGTCTTCTCCTCTGTTGGGCAATGGAGATTATGTTGCTGGACAAATCTCTGATTTAGCTGAGAAGCTAGAACAGGCAGAGAATCAGTTGGCACACTCACGCTTTGGGCCACTAATAGCACCCACGCCTAGAAAGAAAGAGGAGGAATCTCCACTTGCTAAGATTACTCGTGACAGCGCAAAAATAACTGTGGAGCAAGTGCATGGTCTAATGTCGCAGGTCATCAAGGACATTCTGTTTAACTCCGTTCATCAAGCAAACAGAACTCGCACAGAACCATCTGGTCCCGAACCAATGATTGAAAGTTGA 1128 0.5239 MQGKEMEGLSSSSAIAQKTWELENNIIPMDTPGGAATSSTATTTTNADDSIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANRTRTEPSGPEPMIES 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00676 375 SUPERFAMILY JAB1/MPN domain 77 214 - -
Gma06g00676 375 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 75 186 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma06g00676 375 CDD MPN_RPN11_CSN5 67 339 - -
Gma06g00676 375 Pfam Cop9 signalosome subunit 5 C-terminal domain 274 354 IPR040961 -
Gma06g00676 375 ProSiteProfiles MPN domain profile. 78 215 IPR037518 -
Gma06g00676 375 Gene3D Cytidine Deaminase, domain 2 9 280 - -
Gma06g00676 375 PANTHER BNAC07G13420D PROTEIN 41 370 IPR037740 GO:0004222|GO:0008180
Gma06g00676 375 SMART pad1_6 77 214 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma06g00676 375 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 41 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00676 Gma-Chr6 6138804 6142998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00676 K09613 - gmx:100817371 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00683 04 6360831 6366322 Gma06g00676 06 6138804 6142998 GST