Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00651 ATGTCCAACAATCTGGTTTCAGAGCCGATACCAAGTATGCAGATGGCTCAATTGGAGCCCCTTATGAACAAGGTTGATTCGTCAGGGAGACAGATTGAAATGGGGCTCTTGGGTCCCGTATCCAGTGATATCGTGGCACAGTCGCAGGGAACCTCGAATGAACATGTTGGATTATTGAGAGCTGTGCCTGTACAAGCAAGTAATCCAGGAATGCATCAAATTCTTTCCGCTAACAAACAGTCCATGCAAATGGGTATGCTTCTGAAAAGCTCAGGGCCACAGCAGCAGACAACAACTCCCAAGCGCAAGGCACCAATGGAATTATCGTCCAGTATCTCCTTTAACAAGCGGGTTGCAGCAATGGGAAATAGACCTTGGTTGCAGCAAGTACCTAATGCATCAAATAAAGGTTCTCTGCAGATGCAATCCCCATCAAATGCCTCTAGGACACAACATTTGGCAGCTTCTAGCAAGAGAAAAACACAGTTGGATAACACTCCCAGTAAATCTGGGACACCTCGGGCCATGAGTTCTAAAAGTCAAAATACGCAGATGAAGCAGTCCTCCAAGGTTCAAACTGAATCATCTGATAGTGTTAGGTCCAAGATGAGAGAGTCTTTAGCTGCTGCTCTGGCCTTGGTTTCTCAGCAAGGTAAACCTCAGCCCCCAAACAATAATACACCGAATGATGCTGCCAATACTCGGGTTAAATTAGAGAACAGCTCTCAATGTGCTGGATCAGCACCTGCATCCATCGATGCTTCACTGGAGCAAAGGCAGGATATTTCTCAATCAGTTAATTCCTCTTTTGCTGTGGCTGATTCAGTTGGCCATGCGGCAGGAGAGCACATGCAAAGTACAACATATGAAGATTTTCCAGAAAAATACAAGGACTTCGAAGCAGGATCCACAAACGCATCGGACAATGAAAACATACTGAGTTCTATGCATGTCTTGAACTGTGATAAGCAAGATTTCCAGTCAAGTTATACTTTGACTACTGATGATGTTCCTTTCAGTGACGGTTTCTTTATGAAAGATGATCTTCTGCAGGGAAATGGTCTTTCGTGGGTATTATCTGATATGGTGGATGTCGGAAATCAAAGGGAAAGTCAACCTAATATAGAGCAGAGATCAGAACCTGAGGAAACGGGTGGAGGTTGTAGGGAGGAGGTCCCTTTGCCTGAACTTTTGGCATCAAGAATAGAGGCAGAACTCTTCAAGCTGTTTCAAGGTGTGAATAAGAAGTACAAAGAAAAAGGGAGGTCTCTCTTATTCAATTTAAAAGATCGCAATAATCCTGAACTTAGAGAAAGGGTCATGTTTGGTAAAATTCCTCCAGAACAATTATGTTCTATGACAGCTGAAGAACTTGCTTCAAAGGAGCTCTCTCAATGGCGGATAGCCAAGGCTGAGGAGCTTGCTCAAATGGTGGTTTTACCTGATTCAGATGGTGATTTTAGACGTTTGGTCAAGAAGACACATAAAGGTGAATTTCAAGTGGAAGTTGAACACGAAGACAATGTCCCTGTGGAGGAGGTTTCAGGTGGTACAACCTCTGTTGCTCGAAGCCAAACTATAAAAAAGGATGTGGAAGATGCTTCTCCTTCCAAACCTGATGTGAAAACTGATGCCGAGAAAGGCAATTTGCAGAAGGATGATACATTTTCCATCACCATTTCTTCCAACGACGGGGCTGATCCCATGCAAGGGCTTATTACTGATGATGCATTAAAGGACTCTGACTTTCTTGAACCAATTGTTTCTCTTGATGATTTCATGTATTCTCTTACATATGCGCCTCCATTTGAAAATTTACCAGTAGAATCTGGGAAAGTGGTACCTACCTCAGACAAGGATGATTCCGGGGTTGGAACAAAATCAAAACCTGCTGATTTAACACCAAATGAGCAAGCGGATATCACTGGTGATAATAAGTCTGAGAAGTTTCAAAGCACACATGTAAATTCAGATTCTTTAAAGGAGAAAAAGGTTAATGCTGAATCTGGGGCCATTTCTTCTGATGTGGGATACAGTGGGAGTCAAGCTGACATGAAGTCAACTGATGGTCGTACCAAGGAAAGGTCAACTGATGATGTGAAGTCTGCTTCCAGCGATGCTGAGTTGAGAGGCAATCTCTTTCGTGCGGAAGAGAGATATGATAATGACAATAGGTACTCGAAGGATGCAATCCCCACTAAGGGTGAATGCCTCTGGGAGGGAATGCTTCAACCAAATATCTCTAGCACTCATTCAGTCATAAGCATCTTTAAGAGTGGTGAGAAAACTGCTGCTAAAGACTGGCCTGGGTTTCTCGAGATCAAGGGAAGGGTTCGACTTGATGCATTTGAGAAATTTCTGCAAGACCTTCGACAGTCCAGAAGTCGTGCAATCATGGTTTCGCATTTCGTTTCCAAAGAGTCGGATGATCAATCAACTCTACGTGAGGTGGCTGACTCGTACATTTTGGACGAGAGAGTAGGATTTGCTGAGCCTGTCCCTGGAGTTGAACTTTACTTTTGCCCACCTCATAAGAAAACAGTTGAAATGCTCAGCAACATACTTCCAAAGGAACAAATTGAGCCAGTTAATTCTATTGATAATGGCCTAATTGGTATTATTGTATGGAGAAAAACTAATTTAACTTCGTCTATATCACCCACCACTGCATCACATCACAAACATAGCTCTAAAAGACAATACTTCAGTAGGAGACAGCAAGATATAAATGTGAATGCCAATTCTACCCATAAAGCAGTGCCCTCTATGGGCGTTAAGACAACTGAGAATGATGATGATGATGTGCCTCCCGGATTTGGGCCACCAGCGGCCCGAGTGGAGGATGACCTGCCAGAGTTTAATTTTTCCGGCAGTTCAAATCCGTCACATTTGGGCCAAAAATCAATGGGACCACCAAATATGGTCCCATTACACTCGGCTAACCCAGCCCCACCACGCCCTGCAGAACAAATGAGGGAACTTGTGCACAAATATGGGCAAAACAAACCAAATGTACCTTCGGTAAACTGGCAGGATAAATTTGGGGGAACAATTCAACCCTGGAATGATGATGATGATGACATACCTGAATGGCAGCCCCAAAACTCCCAGAATCAGTTTCCTCCCCAACAGACAATGCACAACTTTCATCTTAGGCCTCACATTTTGAATCAATCATTTCCGGGTTCACAGCAACAGCCAATAATGACACCACAATATCTTCAACCCCCAATGAATGTGACCCATGGTCAAAGAAATTTTGACCCTCAGTGGGTTCCTTCTCCCCAGGGTAGCAACCTACAGCCAGGAGGTGGACCACCCTATGCGCAAGGCACTACCTGGCCTCAAGATGCGTCTAGAAGTAGAGGATATTAG 3375 0.4397 MSNNLVSEPIPSMQMAQLEPLMNKVDSSGRQIEMGLLGPVSSDIVAQSQGTSNEHVGLLRAVPVQASNPGMHQILSANKQSMQMGMLLKSSGPQQQTTTPKRKAPMELSSSISFNKRVAAMGNRPWLQQVPNASNKGSLQMQSPSNASRTQHLAASSKRKTQLDNTPSKSGTPRAMSSKSQNTQMKQSSKVQTESSDSVRSKMRESLAAALALVSQQGKPQPPNNNTPNDAANTRVKLENSSQCAGSAPASIDASLEQRQDISQSVNSSFAVADSVGHAAGEHMQSTTYEDFPEKYKDFEAGSTNASDNENILSSMHVLNCDKQDFQSSYTLTTDDVPFSDGFFMKDDLLQGNGLSWVLSDMVDVGNQRESQPNIEQRSEPEETGGGCREEVPLPELLASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMTAEELASKELSQWRIAKAEELAQMVVLPDSDGDFRRLVKKTHKGEFQVEVEHEDNVPVEEVSGGTTSVARSQTIKKDVEDASPSKPDVKTDAEKGNLQKDDTFSITISSNDGADPMQGLITDDALKDSDFLEPIVSLDDFMYSLTYAPPFENLPVESGKVVPTSDKDDSGVGTKSKPADLTPNEQADITGDNKSEKFQSTHVNSDSLKEKKVNAESGAISSDVGYSGSQADMKSTDGRTKERSTDDVKSASSDAELRGNLFRAEERYDNDNRYSKDAIPTKGECLWEGMLQPNISSTHSVISIFKSGEKTAAKDWPGFLEIKGRVRLDAFEKFLQDLRQSRSRAIMVSHFVSKESDDQSTLREVADSYILDERVGFAEPVPGVELYFCPPHKKTVEMLSNILPKEQIEPVNSIDNGLIGIIVWRKTNLTSSISPTTASHHKHSSKRQYFSRRQQDINVNANSTHKAVPSMGVKTTENDDDDVPPGFGPPAARVEDDLPEFNFSGSSNPSHLGQKSMGPPNMVPLHSANPAPPRPAEQMRELVHKYGQNKPNVPSVNWQDKFGGTIQPWNDDDDDIPEWQPQNSQNQFPPQQTMHNFHLRPHILNQSFPGSQQQPIMTPQYLQPPMNVTHGQRNFDPQWVPSPQGSNLQPGGGPPYAQGTTWPQDASRSRGY 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00651 1124 MobiDBLite consensus disorder prediction 672 686 - -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 89 108 - -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 128 203 - -
Gma06g00651 1124 Pfam SPOC domain 734 876 IPR012921 -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 687 708 - -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 1080 1124 - -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 922 943 - -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 128 196 - -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 526 550 - -
Gma06g00651 1124 Gene3D - 374 461 IPR036575 GO:0006351
Gma06g00651 1124 Pfam Transcription factor S-II (TFIIS), central domain 391 474 IPR003618 GO:0006351
Gma06g00651 1124 MobiDBLite consensus disorder prediction 604 708 - -
Gma06g00651 1124 ProSiteProfiles TFIIS central domain profile. 368 486 IPR003618 GO:0006351
Gma06g00651 1124 MobiDBLite consensus disorder prediction 368 389 - -
Gma06g00651 1124 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 31 1104 - -
Gma06g00651 1124 MobiDBLite consensus disorder prediction 512 550 - -
Gma06g00651 1124 PANTHER SPOC DOMAIN / TRANSCRIPTION ELONGATION FACTOR S-II PROTEIN 31 1104 - -
Gma06g00651 1124 SMART mid_6 366 469 IPR003618 GO:0006351
Gma06g00651 1124 SUPERFAMILY Elongation factor TFIIS domain 2 395 462 IPR036575 GO:0006351
Gma06g00651 1124 MobiDBLite consensus disorder prediction 629 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00651 Gma-Chr6 5897860 5904599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00651 - - gmx:100808809 2199.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00658 04 6091743 6097433 Gma06g00651 06 5897860 5904599 GST