Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00644 ATGGAGCACACAGTCTCAAACTCAAGCAGTGTCGAGCAGATTCTGAATCTTCTCTACGCAGCCGGCTACGTCGACGCCACAAATCCCGATGCGCCGCCGTCTCAGAAAATCGCCGCCGGCCTCTCCTGGTGCATCGCCGCCATAACAGGCGACGACAACACACGTGACATCGAGGAATCGTTTGGATTAGTTGGATGCCCGCACCCTCTGCGATCCTCTCACATTCAGGATCTTGATACCGATGCTCTTTTTCCTGTAATTCAGTGGCTTGCGTCACACATTCGGCAAAATCAAGAACACTGTGTCAATGAGGTTCATCATGCTGAAAATACCATTGAAGTGGATGAGTGTAGAACTTCGATTCAGGCATTAAGTGGCAACTTGGATGAACTGAATCAGCGGAAGATGAATGTTGTGAAGCAATTATATATTCTACAAGAGAGAATCAATAAGGAGGGTGCTGATTCTGCAGTACAGAAGTTGCTTTCTTTACTGACATCTTTGAAGAATCTTGAAAAGCAGGAAAAATACTTTCAGTCCAATCGTGATGCTAAACACTCAGAACTTCAAGATGATATTAGTGAATTAGAGAGGAAAATAACAAATGACAGTGATAATGAGAACCTTCCTGATGAACTACATCATTCATTTGGTGAATTAGTTGAAAAAGTCAATTTGATGAAAAAGCAACTTGCTGCTAGACTGAGGGATATTGTGGTATTAAGACGACAGATTGATGACCTACCGTGCCAATCAGAAGTCATCCAGTACGAACGCCGGCTCTCAGAACTGTATGCACAAATCCAGGGAAAACATCGACAAACTCGTAAATACTATGCTACCTACAATGCTCTCTTGGAAATAAAAGAATTGATGCTAAAGGAAACATCTTTATTGAATTCGATCATTTCCCAGTTTCAAGAGGCCTTTAGTAGCACTGATGGACGTATAAAACTTGTTCATTCCATGGAAGGAATTGTCAAGGGAAGTCAACAGAAGCTAGAAAGGGTTCATGTAGGACTTCAAGAAGAAGAGAGAATTCGTAATGATCTGAAGGATAGGTATGCTGCAGCAACCGGTGAGCACAAGCACTGCTATTCTCTGTTGAAAGCTTTTCAGGCCCAATGTGCGAAGAATTAG 1140 0.4272 MEHTVSNSSSVEQILNLLYAAGYVDATNPDAPPSQKIAAGLSWCIAAITGDDNTRDIEESFGLVGCPHPLRSSHIQDLDTDALFPVIQWLASHIRQNQEHCVNEVHHAENTIEVDECRTSIQALSGNLDELNQRKMNVVKQLYILQERINKEGADSAVQKLLSLLTSLKNLEKQEKYFQSNRDAKHSELQDDISELERKITNDSDNENLPDELHHSFGELVEKVNLMKKQLAARLRDIVVLRRQIDDLPCQSEVIQYERRLSELYAQIQGKHRQTRKYYATYNALLEIKELMLKETSLLNSIISQFQEAFSSTDGRIKLVHSMEGIVKGSQQKLERVHVGLQEEERIRNDLKDRYAAATGEHKHCYSLLKAFQAQCAKN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00644 379 Coils Coil 114 148 - -
Gma06g00644 379 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 93 109 379 - -
Gma06g00644 379 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 93 3 100 - -
Gma06g00644 379 Coils Coil 154 174 - -
Gma06g00644 379 Coils Coil 341 361 - -
Gma06g00644 379 Coils Coil 186 206 - -
Gma06g00644 379 Pfam CCDC93, coiled-coil domain 55 148 IPR019159 -
Gma06g00644 379 PANTHER FIDIPIDINE 3 100 IPR039116 -
Gma06g00644 379 PANTHER FIDIPIDINE 109 379 IPR039116 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00644 Gma-Chr6 5830512 5835818 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00644 - - gmx:100806690 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00644 06 5830512 5835818 Gma06g00644 06 5830512 5835818 ECH
Gma04g00651 04 6007530 6012285 Gma06g00644 06 5830512 5835818 GST