Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00592 ATGCAGAGACGAAGTCCTCCGAAGCACAGGCACGATGGGACTTCGCCGCTGCCTCTCGGCATGGATTGGAGCCCTGCGCCTCGAAAATTGAATGGGCGAGATACAGTGTGGCCACACAATCATCGTACTGGTTGGAGTTATTGTGTCACAATACCTTCTTGGGCCTTTGTTCCAAAATCAAGGAATTCAGATCCTATAGTGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCGGAAGGAATTACAAAGGTCCATGGAGTCTTAAGAAGGTTCAATGATTTTCTAAAGTTGTTTGCTGATATTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCGCCACCCAAGGGACTCTTGCGGTTGAAAAGCCGAGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCGCCAAACTATTGTCTGACATTGATATATCAAGATGTGCTGCAGTGGCGTCATTTCTCGAACTAGAAGCAGCTGCTAGATCTTCATTCCAAGATGCAAACCAGCAGAATTCTGAAACAGACCCAGATTCCAACAACACAGTTTATTCTGTGCAATCACCTCTCCAGTCGAGCTTATCATTAGTTGCTGGCAGTTCCTCTGTTGCCTCAGATTATGGTAGTGATACTGCATATGAGCCATCTGACCTAGGAACACCAAGAATTGGACGGGACGATAATTCTGAAGTTGGCACAGATGATTTAACATTAGATGAAGATATGACGAATCCAATAGAAAAGCTTGTGAAATATGGCATAACAAATATTGACGAAGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGATATGTGAACTATGTTGCAGAAAAGGACAAAAATAATGGTAATTTATATGATTCTTCACTTTTAGCTAATAATAACATGGAGCTTTTCTCTGAGCCTGGGCATGCTAAGGTGTTTGGTCATGTTCGTAAGCTTTCAAATGAGAGTGTTGAAAGCGATGGAAGCTCAATACGAGGTAGTGACATGTCTAATTTTGGGATTCCAAGTTCATCTGGTGATGGCTCTCATGACCTTCCTGGATCTGCTTTGGTTTCAAGAGAGACAGATATTATGGGCCACACAAAGTCGAAGTCTACTGATGATACTCAATTAGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACCATGCAGCGAAGGCTAGGCACTGCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTCGCAACAAAGCTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTAATTGAGAGAGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTAGAAGAAAATCCTTGGAAATGGAGATGAAATTAAAGTCTGAATCGGGGAGAAATTCTTATCAGGATTTGACTAAGGAATCAATTGTTCAGCAGAATGATGTACTGTATGAGAATTTAGATGCTACTAAGGAGCAGCTGGAAATTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGATGTTAAAGTTCTCGTTAAAGAGGTCAAATCTCTCCGTAATTCCCAAACAAAGTTAAAGAAAGAACTTAGTGAGTCAATAAAGGAACACAGTGAAACTGAGAAACTACTTCTGCATGAAAGAGAGAAGAGGGAACAGGCAGAAGCTGCTTGGAGAAAACTGCTGGAGAAGTGCAGGGTTCTTTTCAACCAGCTTCAAGAATGCAATGTCAGTCTTCCTTATGAATACGAAGATAGGACAATCGTGAATTCATCATCATCAACTGATGCTTTTAATCAGTTAACGACATCTGATGACCAAATGGACATCCTACTAGCAGAGGTAGAAAACTTAGAGAAGGACTACGGAAGTGCGGCTTCCAATGTAGATAAAACCACCAATGACATAAAAGATGGTGTAATCTGTGATGATGAAGTGAGAAAGATCATAGCAGATTTGTTCATCGATAATGTTAGATTGAGAAAACAGACAAACCGCGTCACAAGGCAGGCTCTCAAATTGGATATGACAGCAAGTGATGATTCCCCTTCGGTGGAGACTCTAACAAGTATTTAG 2166 0.4104 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKLNGRDTVWPHNHRTGWSYCVTIPSWAFVPKSRNSDPIVFYRVQVGVQSPEGITKVHGVLRRFNDFLKLFADIKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWIAKLLSDIDISRCAAVASFLELEAAARSSFQDANQQNSETDPDSNNTVYSVQSPLQSSLSLVAGSSSVASDYGSDTAYEPSDLGTPRIGRDDNSEVGTDDLTLDEDMTNPIEKLVKYGITNIDEGLFMGQTILEQLEGLPRHKANARYVNYVAEKDKNNGNLYDSSLLANNNMELFSEPGHAKVFGHVRKLSNESVESDGSSIRGSDMSNFGIPSSSGDGSHDLPGSALVSRETDIMGHTKSKSTDDTQLVLPLDQRNKLNRILSTMQRRLGTAKTDMEDLIVRLNQEIAAKDFLATKLKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESGRNSYQDLTKESIVQQNDVLYENLDATKEQLEILSKQYGELEAKSKADVKVLVKEVKSLRNSQTKLKKELSESIKEHSETEKLLLHEREKREQAEAAWRKLLEKCRVLFNQLQECNVSLPYEYEDRTIVNSSSSTDAFNQLTTSDDQMDILLAEVENLEKDYGSAASNVDKTTNDIKDGVICDDEVRKIIADLFIDNVRLRKQTNRVTRQALKLDMTASDDSPSVETLTSI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00592 721 Coils Coil 539 566 - -
Gma06g00592 721 Coils Coil 507 534 - -
Gma06g00592 721 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Gma06g00592 721 SMART PX_2 55 160 IPR001683 GO:0035091
Gma06g00592 721 MobiDBLite consensus disorder prediction 168 187 - -
Gma06g00592 721 Coils Coil 631 665 - -
Gma06g00592 721 MobiDBLite consensus disorder prediction 1 24 - -
Gma06g00592 721 Gene3D - 46 186 IPR036871 GO:0035091
Gma06g00592 721 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Gma06g00592 721 MobiDBLite consensus disorder prediction 210 233 - -
Gma06g00592 721 Pfam PX domain 86 158 IPR001683 GO:0035091
Gma06g00592 721 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 713 IPR044588 GO:0015031
Gma06g00592 721 Coils Coil 422 456 - -
Gma06g00592 721 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00592 Gma-Chr6 5363632 5371769 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00592 - - gmx:100789039 1373.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00592 06 5363632 5371769 Gma06g00592 06 5363632 5371769 ECH
Gma04g00608 04 5550364 5559096 Gma06g00592 06 5363632 5371769 ECH
Gma04g00608 04 5550364 5559096 Gma06g00592 06 5363632 5371769 GST