Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00580 ATGTACAAGGTAGCAAACGCCTCAGAATACCTTGTGATCACTGGGGTTGGAATCACAGACATAAAGCTTGCAAAGAAAGCATGGGTTCTCCCAGGCCAGTCATGCACCGTTTTCGACCTCTCTCCGGTGAACTACACCTTCGAGGTTCAGGCCATGAGCGCCGAGAAGCTCCCTTTCATTCTCCCTGCAGTCTTCACCATCGGTCCCAGAGTGGAGGACGAAGACAGCCTTCTCAAATACGCCAGACTCCTCTCCTCCCACGACAAGCTCTCTCACCATGTCAAGGAGCTTGTCCAGGGCATCATCGAGGGTGAGACGCGTGTCCTCGCTGCTTCCATGACCATGGAGGAGATTTTCAGAGGCACAAAATCGTTTAAACAGGAAGTGTTCGAGAAGGTTCAGCTGGAGCTTAACCAGTTCGGCCTTCTGATTTACAACGCCAACGTTAAGCAACTTGTTGACGTGCCAGGTCATGAGTATTTCTCTTACTTGGGCCAGAAGACTCAGATGGAAGCTGCCAACCAAGCCAAAGTTGACGTGGCTGAGGCCAAGATGAAAGGAGAGGTTGGATCGAAGCAGAGACAAGGGCAAACGCTTCAGAATGCTGCCAAGATCGATGCGGAAACTAAGATAATATCGACGCAGAGGCAAGGAGATGGTAAGAAGGAGGAAATAAAGGTGAGGACAGAGGTTAAGGTGTTTGAGAATGAGAGAGAGGCTGTGGTGGCAGAGGCAAATTCCGAGCTTGCAAAGAAAAAAGCTGTGTGGGCTCAAACGGCGCAGGTGGCAGAAGTGGAGGCCGCCAAAGCTGTGGCTCTCAGAGAAGCGGAATTGCAGAGAGAAGTTGAGAGGATGAATGCTCTTACAAGGACTGAGAAGCTTAAAGCTGAGTTCCTCAGCAAAGCAAGTGTTGAGTATGAAACCAAGGTACAAGAGGCAAACTGGGAGTTGTACAAGAAGCAAAAGGCGGCGGAAGCAATATTGTTTGAGAAGGAGAAAGAGGCGGAAGCGCAAAAAGCATTAGCGGAGGCAGCATTTTTCAGTCGGCAACAAGAAGCTGAAGCAGAACTATTTGCAAAGAAAAAGGAGGCAGAAGGGCTTGTGGCACTTGGGCAGGCCCAGGGGGCATATTTAAAGACACTTCTTGGTGCACTGGGAGGCAACTATGGCAACCTAAGGGACTACTTGATGATAAATAGTGGCATGTTTCAAGAGATTGCCAAGACTAATGCCGATGCAATTCGTGGACTTGAGCCAAAGATTAGTATTTGGACTAATGGTGGAGATACAAATGATGGCTATGGAAGTGGTGCCATGAAGGATGTTGCTGGTGTCTACAAGATGTTGCCACCTTTGTTTAAGACAGTTCATGAGCAAACCGGTATGCTGCCACCCGCTTGGATGGGAACCCTGCCCGATAATGGTTCTTGA 1431 0.492 MYKVANASEYLVITGVGITDIKLAKKAWVLPGQSCTVFDLSPVNYTFEVQAMSAEKLPFILPAVFTIGPRVEDEDSLLKYARLLSSHDKLSHHVKELVQGIIEGETRVLAASMTMEEIFRGTKSFKQEVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEAKMKGEVGSKQRQGQTLQNAAKIDAETKIISTQRQGDGKKEEIKVRTEVKVFENEREAVVAEANSELAKKKAVWAQTAQVAEVEAAKAVALREAELQREVERMNALTRTEKLKAEFLSKASVEYETKVQEANWELYKKQKAAEAILFEKEKEAEAQKALAEAAFFSRQQEAEAELFAKKKEAEGLVALGQAQGAYLKTLLGALGGNYGNLRDYLMINSGMFQEIAKTNADAIRGLEPKISIWTNGGDTNDGYGSGAMKDVAGVYKMLPPLFKTVHEQTGMLPPAWMGTLPDNGS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00580 476 PANTHER FLOTILLIN-RELATED 2 472 IPR027705 -
Gma06g00580 476 PANTHER FLOTILLIN-LIKE PROTEIN 3 2 472 - -
Gma06g00580 476 Gene3D Band 7 domain 38 155 IPR036013 -
Gma06g00580 476 Pfam SPFH domain / Band 7 family 9 184 IPR001107 -
Gma06g00580 476 CDD SPFH_flotillin 28 175 - -
Gma06g00580 476 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00580 Gma-Chr6 5245151 5247137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00580 K07192 - gmx:547522 851.277