Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00550 ATGGCGTTTTGGAGATCTCTCGTAGCGTTCTCTGCGGCTCTTCTGCTTCTCATCCATGGCGCTCACTGCTTCTACCTCCCCGGCGTCGCTCCACAGGACTTCCTGAAGGGAGATCAATTGCAAGTGAAAGTAAATAAATTAACATCAACAAAGACCCAGCTTCCATATTCATATTATTCACTTCCCTACTGTGCCCCATCAAAAATACAGGATAGTGCAGAAAATCTTGGGGAAGTACTTCGTGGTGACCGCATTGAGAATTCTCTCTATGTGTTTAAAATGCGCGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTTGATGCTAAAACTGCTAAGGAGTTCAAAGAGAAGATCAGTGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTTTTCCCTTGAAACGGACTGATCAGGATTCAACTGTCTATCAGCTTGGTTTCCTTGTTGGACTCAAAGGGCAGTATAGTGGGAGCAAGGAGGAGAAATATTTTATTTACAACCATTTGGCATTTACTGTCAAGTACCATAAAGACATGCTAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTACGCCATTCAGTGTTAAACATGAATACGAAGGTAAATTTGATGTAAGAACGACTCGTTTGACAACCTGTGACCCTCATGCTAAGCACACAGTTGTCAACTCCAACAGTCCCCAAGAGGTTGAAGAGGGCAAGGAAATTATCTTCACATATGATGTTGAATTCCAGGAGAGTGACGTGAAGTGGGCTTCAAGATGGGATGCTTATTTGCTAATGAATGATGATCAAATCCACTGGTTCTCTATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCTGGCATGGTGGCAATGATTATGCTGAGGACACTGTACCGTGACATTGCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAGGAGACTGGTTGGAAGCTTGTCCATGGTGATGTATTTAGGCCCCCCAACAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGCATGATACTTGTAACCATGATATTTGCTGTCCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATCTTTGCTGGGTACTCATCAACTCGCTTGTACAAAATGTTCAAAGGGTCGGAGTGGAAAAGAGTTGCCCTCAGGACTGCAACCATGTTCCCTGCAGTTGTCTCTGCCATTTTCTTTGTTTTAAATGCTCTCATATGGGGCCAAAAATCATCAGGAGCTGTGCCATTTGGCACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGTTTTTGTGGGTAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCCTGTGAAAACGAACAAGATCCCAAGACAGATCCCGGAGCAGGCATGGTACATGAACCCAGTGTTCTCAGTTCTGATTGGTGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCCTCTTTTTGGTCTTCATCATCCTCATTGTCACTTGTGCTGAAATAACCGTTGTGCTCTGCTACTTCCAGCTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCGTACCTTACCTCTGGTTCCTCTGCACTGTACCTCTTTCTTTATGCAACTTTCTACTTCTTCACCAAGCTTGAAATCACAAAGCTCATCTACTCCTCGGTCAAAATTGATTAG 1809 0.4334 MAFWRSLVAFSAALLLLIHGAHCFYLPGVAPQDFLKGDQLQVKVNKLTSTKTQLPYSYYSLPYCAPSKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNILCNLKLDAKTAKEFKEKISDEYRVNMILDNLPLVFPLKRTDQDSTVYQLGFLVGLKGQYSGSKEEKYFIYNHLAFTVKYHKDMLTESARIVGFEVTPFSVKHEYEGKFDVRTTRLTTCDPHAKHTVVNSNSPQEVEEGKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYSSTRLYKMFKGSEWKRVALRTATMFPAVVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITVVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLIYSSVKID 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00550 602 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 596 - -
Gma06g00550 602 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016021
Gma06g00550 602 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 596 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00550 Gma-Chr6 4856503 4860258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00550 6 595 Miscellaneous Gene Families AT5G10840 83.953 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00550 K17086 - gmx:100804029 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00550 06 4856503 4860258 Gma06g00550 06 4856503 4860258 ECH
Gma04g00563 04 5034339 5039003 Gma06g00550 06 4856503 4860258 GST
Gma17g02129 17 38833836 38837678 Gma06g00550 06 4856503 4860258 PCT
Gma14g00935 14 10503981 10508763 Gma06g00550 06 4856503 4860258 PCT
Gma06g00550 06 4856503 4860258 Gma17g02129 17 38833836 38837678 PCT
Gma06g00550 06 4856503 4860258 Gma14g00935 14 10503981 10508763 PCT