Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00513 ATGTTACTGTACAAGTACTTGAGTACTACATTGTATAGAACTTGGAATACTATATACTACATCTTCCTCCATGGAGAAGAACACAAACTGAACTTGTTGCTTTCTAGTTTCGCTTCACACTTCACACTTAACGTATCCGCCAAATCTAGGGGCATATTCCATTCCACCACCATTTCTCTGCAAAAGAGACCCTTTTGCTTCTTTTCAGATAACATGGGCTTAGTCTGCAGCAGAGGTCGTCGTTTTCGTGAAGCTGATGCTGAAGAAAATGCTCAGGATGCAGAAATTGAAAGAAGAATCAAGTTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTTTTATTACTAGGTTATATGATTGCTATTGTTATTTATTTATTTGTTTATAATATGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCTGAGCTAAAAAGCTACATACCAGTCATTCATGCTAATGTGTATCAGGCAATAAAAGTACTGCATGATGGGTCAAAAGAGTTGGCGCAGAATGATGTTGATTCTTCAAAGTATGTAATATCTCATGAAAACCAGAACATTGGTGAAAAGCTCTCAGAAATTGGAGCCAGGCTGGATTATCCTTGTTTTACCAAAGAGCTTGCACAGGAAATAGAGAGACTGTGGGAGGATGCTGCAATTCAGGAAACATGTGCCCGTGGTAATGAACTCCAAGTTCCAGATTGTGCCCATTATTTCATGGAAAATTTGGAGAGGCTGTCTGATGCAAACTATGTTCCAACAAAGGAGGATGTTTTGTATGCAAGAGTTCGTACAACTGGTGTTGTTGAGATCCAGTTCAGCCCTGTTGGAGAAAATAAGAGAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGTGGTCAGAGAAATGAGAGGAGAAAATGGATCCATCTTTTTGAAGGAGTTACAGCTGTAATATTCTGTGCTGCAATTAGCGGGTATGATCAGACACTTTATGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTCGAGTGGGTCCTGAAGCAACCATGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTTGAAAAGAAGATCCTGAATGTTCCGCTCAATGTATGTGAGTGGTTCAAAGATTACCAGCCAGTTTCAACAGGGAAACAAGAGATCGAACATGCGTACGAGTTTGTGAAGAAAAAGTTTGAGGAATTGTATTTCCAGAGCACTGCTCCTGACCGTGTAGATCGCGTGTTCAAGATCTATCGGACGACTGCCCTTGATCAGaagcttgtgaagaagactttcaagcttgttgatgagactttGAGACGGAGGAATCTCTTTGAAGCTGGCTTATTATGA 1377 0.3827 MLLYKYLSTTLYRTWNTIYYIFLHGEEHKLNLLLSSFASHFTLNVSAKSRGIFHSTTISLQKRPFCFFSDNMGLVCSRGRRFREADAEENAQDAEIERRIKLETKAEKHIQKLLLLGYMIAIVIYLFVYNMQIKLLFQTGFDEAELKSYIPVIHANVYQAIKVLHDGSKELAQNDVDSSKYVISHENQNIGEKLSEIGARLDYPCFTKELAQEIERLWEDAAIQETCARGNELQVPDCAHYFMENLERLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISGYDQTLYEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILNVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEELYFQSTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00513 458 ProSiteProfiles G-alpha domain profile. 112 458 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 72 458 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 SUPERFAMILY Transducin (alpha subunit), insertion domain 141 266 IPR011025 GO:0007165
Gma06g00513 458 SMART galpha_1 90 457 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 Gene3D - 132 446 IPR027417 -
Gma06g00513 458 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 72 458 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 455 IPR027417 -
Gma06g00513 458 Pfam G-protein alpha subunit 94 446 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 CDD G-alpha 132 452 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 410 422 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 166 180 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 274 289 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 344 355 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 151 164 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 98 107 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 393 408 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Plant G protein alpha subunit signature 190 204 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gma06g00513 458 PRINTS Alpha G protein (transducin) signature 357 366 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 PRINTS Alpha G protein (transducin) signature 254 276 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 PRINTS Alpha G protein (transducin) signature 289 306 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 PRINTS Alpha G protein (transducin) signature 311 339 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma06g00513 458 Gene3D - 142 267 IPR011025 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00513 Gma-Chr6 4378462 4384568 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00513 K19729 - gmx:100800120 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00513 06 4378462 4384568 Gma06g00513 06 4378462 4384568 ECH
Gma04g00523 04 4668754 4674778 Gma06g00513 06 4378462 4384568 GST