Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00512 ATGGGTACTAAACAAGTTTGTTGGGCCATCATTGTAGTATGGCTTACATTGTTTGAAGGAAATACAATGCTTGTTAAGGGTGATTTTAATTACAAGGAGGCTCTGACCAAGTCCCTTATCTTCCTAGAGGCACAACGTTCAGGGAAGCTCCCTTCAAATAATAGGGTGCCTTGGAGAGGAGACTCAGCACTCGATGATGGCAAACTCGCTAATGTGGACCTTGCTGGGGGATACTATGATGCAGGGGACAACGTGAAATATGGGCTCCCCATGGCTTTCACCGTTACTACGCTAGCATGGGGAGCCATTTTTTACAAGTCAGAATTTAAAGCTGCAAATGAGTTAGATAATATTCAAGATGCCATTCGTTGGGGTACCGATTATTTTCTCAAAGCTAGTTCTCGACACAAAAGATTATATGTGGAGGTTGGGGACCCGGAAGATGATCACCATTGTTGGGCTCCACCAGAAAATATGAAGACAAAGAGAAGTGTTAAGATGATTACTAGTGACACTCCCGGGACTGAGATCGCGGCTGAAACTGCAGCAGCAATGGCTGCTTCTTCCATTGTTTTTAGGCCCAAAGATCGTAAATATGCTCGTCGTCTTCTCAACAGAGCTAAATTGCTTTTCCAAATGGCCAAATCGCATAAAGGAACTTTTGATGGAGAGTGTCCCTTCTACTGCTCTTATTCCGGCTATAATgacgagatgatgtgggcagcaacatggctatacatggcaaccaggaagtctgtgtatatgaagtacataACAGAAGAATGCATGAGTGCAAGTGTAGCAGAATTTAGTTGGGACCTTAAATATGCTGGAGCTCAAATCCTTCTCAGCCAGTTACATTTCGAAGGTCAAAAGAATTTGGAAACATTCAAAAGCCATGCCGAAAGTTTCATATGCTCTGTCCTACCTGACAGTCCCTACCACCAGATTAAACTGTCCCCTGGTGGCTTTATTCATTTGAGAGATGGAGCCAACACACAGTATGCCACGGGCACAGCTTTCTTGTTCACTGTATATAGTGATTTGCTTGACAAACATAATCAGAAAGTCACATGTGGAGACAAACATTTTAGCTCCTcccatctccttgcttttgctaagaaacaaATGGATTACATACTAGGGAAAAACCCTGAAAGAAGATCTTACATGGTTGGATTTGGAAAGAACCCACCAACGCAGGCTCACCATAGAGGTGCTTCGGTGCCAAAACTGAAAAAGGATGAAGAGGTGGTTTGCGCCACGAGCTTCTCCAAATGGTTTCAAAAAGATGCACCTAACCCCCATGAACTCACTGGTGCCATCTTGGGTGGACCTGACTTCAACGACAAGTTCAACGATAAACGTTGGGACTCGCCTAAGACTGAACCATGCACTTACATCAATTCCCTAGCTGCTGGAGCTCTTGCCAAGCTTGCATCTTTGAGTTGA 1452 0.4112 MGTKQVCWAIIVVWLTLFEGNTMLVKGDFNYKEALTKSLIFLEAQRSGKLPSNNRVPWRGDSALDDGKLANVDLAGGYYDAGDNVKYGLPMAFTVTTLAWGAIFYKSEFKAANELDNIQDAIRWGTDYFLKASSRHKRLYVEVGDPEDDHHCWAPPENMKTKRSVKMITSDTPGTEIAAETAAAMAASSIVFRPKDRKYARRLLNRAKLLFQMAKSHKGTFDGECPFYCSYSGYNDEMMWAATWLYMATRKSVYMKYITEECMSASVAEFSWDLKYAGAQILLSQLHFEGQKNLETFKSHAESFICSVLPDSPYHQIKLSPGGFIHLRDGANTQYATGTAFLFTVYSDLLDKHNQKVTCGDKHFSSSHLLAFAKKQMDYILGKNPERRSYMVGFGKNPPTQAHHRGASVPKLKKDEEVVCATSFSKWFQKDAPNPHELTGAILGGPDFNDKFNDKRWDSPKTEPCTYINSLAAGALAKLASLS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00512 483 SUPERFAMILY Six-hairpin glycosidases 27 481 IPR008928 GO:0005975
Gma06g00512 483 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 379 405 IPR018221 -
Gma06g00512 483 PANTHER ENDO-1,4-BETA-GLUCANASE 8 480 - -
Gma06g00512 483 Gene3D - 25 483 IPR012341 GO:0005975
Gma06g00512 483 Pfam Glycosyl hydrolase family 9 31 476 IPR001701 GO:0004553|GO:0005975
Gma06g00512 483 PANTHER ENDOGLUCANASE 16-RELATED 8 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00512 Gma-Chr6 4373555 4376077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00512 21 481 Glycoside Hydrolase AT3G43860 70.563 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00512 K01179 - gmx:100811509 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00512 06 4373555 4376077 Gma06g00512 06 4373555 4376077 ECH