Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00511 ATGGGTACTAAACACGTATATTGGGCCATCATTGTAGTATGGCTTACATTATTTGAAGGAAATACAATGCTTGTTAAAGGTGATTTTAATTACAAGGAGGCTCTGACCAAGTCCCTTATCTTCCTAGAGGCACAACGTTCAGGGAAGCTCCCTTCAAATAATAGGGTGCCTTGGAGAGGAGACTCAGCACTCGATGATGGCAAACTCGTTAATGTGGACCTTGCTGGGGGATACTATGATGCAGGGGACAACGTGAAATATGGGCTTCCCATGGCTTTCACCGTTACTACGCTAGCATGGGGAGCCATTTTTTACAAGCCAGAATTTGAAGCTGCAAATGAGTTGGGTAATGTTCACGATGCTATTCGTTGGGGTACCGATTATTTTCTCAAAGCTAGTTCTCGACACAAAAGATTATATGTGGAGGTAGTTGGGGACCCGGAAGATGATCACCACTGTTGGGCTCCACCAGAAAATATGAAGACAAAGAGAAGTGTTAAGATGATTACTAGTGACATTCCCGGAACTGAGATCGCGGCTGAAACTGCAGCAGCAATGGCTGCTTCTTCCATTGTTTTTAGGCCCAAAGATCGTAaatatgctcgtcgtcttctcaacagagctaaattgctTTTCCAAATGGCTAACTCGAATAAAGGAACGTATGATGGAGAGTGTCCCTTCTACTGCTCTTATTCCGGCTATAATgacgagatgatgtgggcagcaacatggctatacatggcaaccaggaagtctgtgtatatgaagtacataACAGAAGAATGCATGAGTGCAAGTGTAGCAGAATTTAGTTGGGACCTTAAATATGCTGGAGCTCAAATCCTTCTCAGCCAGTTACATTTCGAAGGTCAAAAGAATTTGGAAACATTCAAAAGCCATGCCGAAAGTTTCATATGCTCTGTCCTACCTGATAGTCCCTACCACCAGATTAAATTGTCCCCTGGTGGCTTTATTCATTTAAGAGATGGAGCCAACACACAGTATGCCACCGGCACTTCTTTCTTGTTCACTGTATATAGTGATTTGCTTGCTAAACATAATCAGAAAGTCACATGTGGAGACAAACAATTTAGCTCGTCCCATCTTCTTGCTTTTGCTAAGAAACAAATGGATTACATACTAGGGAACAACCCTGAAGGAAGATCATACATGGTAGGATTTGGAAAGAACCCACCAACGCAAGCTCACCATAGAGGTGCTTCCGTTTCCATATTGAAAAAGGGTGAAGAGGTGGTTTGTGCCTTGAGCTTCACGCAATGGTTTCAAAAAGATGAACCTAACCCCAATGAACTCACTGGTGCCATTTTGGGTGGACCTGACATCAACGACAAGTTCAACGATAAACGTTGGGATTCGCCTAAGACTGAACCATGCACCTACATCAATTCCCTAGCTGCTGGGGCTCTAGCTAAACTTGCATCTTTGGGTTGA 1455 0.4027 MGTKHVYWAIIVVWLTLFEGNTMLVKGDFNYKEALTKSLIFLEAQRSGKLPSNNRVPWRGDSALDDGKLVNVDLAGGYYDAGDNVKYGLPMAFTVTTLAWGAIFYKPEFEAANELGNVHDAIRWGTDYFLKASSRHKRLYVEVVGDPEDDHHCWAPPENMKTKRSVKMITSDIPGTEIAAETAAAMAASSIVFRPKDRKYARRLLNRAKLLFQMANSNKGTYDGECPFYCSYSGYNDEMMWAATWLYMATRKSVYMKYITEECMSASVAEFSWDLKYAGAQILLSQLHFEGQKNLETFKSHAESFICSVLPDSPYHQIKLSPGGFIHLRDGANTQYATGTSFLFTVYSDLLAKHNQKVTCGDKQFSSSHLLAFAKKQMDYILGNNPEGRSYMVGFGKNPPTQAHHRGASVSILKKGEEVVCALSFTQWFQKDEPNPNELTGAILGGPDINDKFNDKRWDSPKTEPCTYINSLAAGALAKLASLG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00511 484 Gene3D - 25 484 IPR012341 GO:0005975
Gma06g00511 484 PANTHER ENDOGLUCANASE 16-RELATED 7 481 - -
Gma06g00511 484 SUPERFAMILY Six-hairpin glycosidases 27 482 IPR008928 GO:0005975
Gma06g00511 484 Pfam Glycosyl hydrolase family 9 31 477 IPR001701 GO:0004553|GO:0005975
Gma06g00511 484 PANTHER ENDO-1,4-BETA-GLUCANASE 7 481 - -
Gma06g00511 484 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 380 406 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00511 Gma-Chr6 4363540 4366313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00511 21 482 Glycoside Hydrolase AT3G43860 70.626 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00511 K01179 - gmx:100810971 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00511 06 4363540 4366313 Gma06g00511 06 4363540 4366313 ECH