Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00468 ATGGAACGTGCACGGAGGCTAGCAAACAGGGCGATTCTGAAGAGGCTAATTTCTACGGCGGGGGATAATTCCCATTCCCTTTTAAGACCCAAACCAGAGAACTCGATCTTAGGAAGCAACAGAAAACTCTCACACTATGTCCCATCTCGATCCATTTCCCTGGCAGCACTCAAGCCGAGCGATTCATTCCCTCGGCGCCACAACTCCGCCACCTCCGAGGAACAAACCAAGATGGCCCAGACATGCGGCTTCGACACCCTCGACTCCCTCATCGACGCCACCGTCCCCAAATCAATCCGTCTGAGCGACATGTCGTTCAGCGTCTTCAACGAGGGGCTAACGGAGTCCGAAATGATGTCGCACATGAACAGCctagcgtcgaagaacaagtgcttcaagtcgtacatcgggatgggatactacaacacgcacgtgccgcccgtgatccttcgcaacatcatggagaaccccgcgtggtacactcagtatactccttaccaggccgagatatctcagggccgtctcgagtccctcatgaatttccaaaccgtgatctcagatctctccgctcttccaatgtccaacgcttcgttactcgacgaaggaactgcggccgctgaagcaatgtccatgtgtaacaacattcacaagggaaaaagaaagacttttatcattgccaataattgtcaccctcaaaccgttgatgtttgcgtcaccagagctgctggttttggtattaaggttgttaccgtggatgttaaggatgtggattataaatccggtgatgtttgtggggtgcttgttcagtatccggggactgagggtgaggttttggactacggggagtttgtgaaggaggctcatgcgtatggagtcaaggttgttatggcgacggatttgttggctctgactgtgctgaagcctccaggggaaatgggggtggatattgttgttgggtctgctcagaggtttggggttcccatggggtatgggggtccacacgccgcgttccTCGCCACGTCGCAAGAGTATAAGAGGATGATGCCTGGGAGGATCATTGGGGTAAGTGTTGATTCTGGTGGAAAGCCAGCTTTGAGAATGGCAATGCAAACTAGGGAGCAACATATCCGGAGGGACAAGGCCACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTATATCATGGACCCGAAGGACTTAAAACCATTGCCCAACGGGTTCATGGTCTTGCCGGGGTGTTTGCTCAGGGATTAAAAAAACTTGGAACCGTGGAAGTTCAGGACCATCCATTCTTTGACACTGTGAAAATTAAGACTGCCAATGCCCATGCAATTGCTGATGCTGCTCGCAAGAATGAAATCAATTTGCGGGTTGTTGATGGGAACACTATCACTGTTGCCTTCGATGAAACAACCACCTTGGAGGATGTTGATAATCTTTTCAAAGTTTTTTCTGATGGCAAGCCTGTCTCCTTCACAGCTGCATCTCTTGCCCCAGAAGTTCAGACTGCAGTTCCTTCTGGACTTACTAGAAACAGTCCTTATCTGACACACCCTATCTTTAACACGTACCACACTGAGCATGAGGTTCTCAGGTACATTCATAGGCTTCAATCAAAAGATCTTTCATTGTGCCACAGTATGATCCCGCTGGGATCTTGTACAATGAAGCTGAATGCTACAACTGAAATGATGCCTGTGACATGGCCTAGCTTTGCTAACATTCACCCTTTTGCACCAATTGAACAGGCTCAAGGTTATCAGGAAATGTTTGAAAATTTGGGTAAACTGTTGTGTACAATCACCGGGTTTGACTCCTTCTCTTTGCAACCTAATGCTGGTGCTGCTGGAGAATATGCTGGACTGATGGTTATTCGTGCATATCATTTGGCAAGAGGAGACCACCATCGCAATGTCTGCATTATACCCGTCTCAGCACATGGTACAAATCCTGCCAGTGCTGCTATGTGTGCAATGAAAATTGTATCTGTTGGAACTGATGCCAAGGGAAACATCAATATTGAAGAGTTGAGGAAGGCTGCTGAAACACATAAGGACAACCTAGCTGCTCTTATGGTAACATATCCTTCAACCCATGGTGTTTATGAAGAAGGTATTGATGAGATATGCAAGGTTATTCATGATAACGGAGGTCAAGTATATATGGATGGTGCTAACATGAATGCACAGGTGGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTGAATCTCCATAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGAGTAAAGAAACACTTGGCACCATTTTTACCATCACATCCAGTGGTTTCCACTGGTGGCATTCCTGCCCCCGGCAAGTCACAACCACTTGGTACCATTTCTGCTGCACCATGGGGCTCAGCACTGATATTGCCTATCTCATACTCTTACATAGCCATGATGGGTTCTAAAGGACTCACCGAAGCATCAAAAACAGCCATTTTGAATGCAAACTATATGGCAAAACGATTGGAGAATCATTACCCTGTTCTTTTCCGTGGGGTCAATGGAACAGTTGCTCATGAGTTCATTGTTGACTTAAGAGGCTTTAAGAATACTGCTGGGATAGAGCCTGAAGATGTTGCAAAGCGTCTTATGGACTATGGCTTCCATAGTCCGACAATGTCATTTCCTGTGCCCGGCACACTCATGATTGAACCAACTGAAAGTGAAAGCAAGTCCGAGTTAGACAGGTTTTGTGATGCTCTTATTTCCATTCGACAAGAAATTGCTGAGATTGAGAAAGGAAAGGCTGACATTAACAACAATGTTCTAAAGTGTGCTCCTCATCCACCACCAGTGCTCATGGGAGATGCATGGACAAAACCATACTCTCGAGAATATGCAGCCTTCCCAGCTTCCTGGCTCCGTGTTTCTAAGTTCTGGCCTTCCACAGGACGTATTGATAATGTGTACGGTGATCGCAACCTCGTTTGCACACTTCTCCCAACATCACAGGCTGTTGAAGAACAAGCTGCTGCAACGGCCTAA 3072 0.3691 MERARRLANRAILKRLISTAGDNSHSLLRPKPENSILGSNRKLSHYVPSRSISLAALKPSDSFPRRHNSATSEEQTKMAQTCGFDTLDSLIDATVPKSIRLSDMSFSVFNEGLTESEMMSHMNSLASKNKCFKSYIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLMNFQTVISDLSALPMSNASLLDEGTAAAEAMSMCNNIHKGKRKTFIIANNCHPQTVDVCVTRAAGFGIKVVTVDVKDVDYKSGDVCGVLVQYPGTEGEVLDYGEFVKEAHAYGVKVVMATDLLALTVLKPPGEMGVDIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSGGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAQGLKKLGTVEVQDHPFFDTVKIKTANAHAIADAARKNEINLRVVDGNTITVAFDETTTLEDVDNLFKVFSDGKPVSFTAASLAPEVQTAVPSGLTRNSPYLTHPIFNTYHTEHEVLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPIEQAQGYQEMFENLGKLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCAMKIVSVGTDAKGNINIEELRKAAETHKDNLAALMVTYPSTHGVYEEGIDEICKVIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPGKSQPLGTISAAPWGSALILPISYSYIAMMGSKGLTEASKTAILNANYMAKRLENHYPVLFRGVNGTVAHEFIVDLRGFKNTAGIEPEDVAKRLMDYGFHSPTMSFPVPGTLMIEPTESESKSELDRFCDALISIRQEIAEIEKGKADINNNVLKCAPHPPPVLMGDAWTKPYSREYAAFPASWLRVSKFWPSTGRIDNVYGDRNLVCTLLPTSQAVEEQAAATA 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00468 1023 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1023 - -
Gma06g00468 1023 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1023 IPR020581 GO:0004375|GO:0006546
Gma06g00468 1023 SUPERFAMILY PLP-dependent transferases 66 491 IPR015424 -
Gma06g00468 1023 CDD GDC-P 535 930 IPR020581 GO:0004375|GO:0006546
Gma06g00468 1023 SUPERFAMILY PLP-dependent transferases 531 1008 IPR015424 -
Gma06g00468 1023 TIGRFAM gcvP: glycine dehydrogenase 66 1007 IPR003437 GO:0004375|GO:0006544
Gma06g00468 1023 Pfam Glycine cleavage system P-protein 66 492 IPR020581 GO:0004375|GO:0006546
Gma06g00468 1023 Pfam Glycine cleavage system P-protein 509 785 IPR020581 GO:0004375|GO:0006546
Gma06g00468 1023 Gene3D Aspartate Aminotransferase, domain 1 822 962 IPR015422 GO:0003824
Gma06g00468 1023 CDD GDC-P 115 492 IPR020581 GO:0004375|GO:0006546
Gma06g00468 1023 Gene3D - 146 406 IPR015421 GO:0003824
Gma06g00468 1023 Gene3D - 574 802 IPR015421 GO:0003824
Gma06g00468 1023 Gene3D Aspartate Aminotransferase, domain 1 135 488 IPR015422 GO:0003824
Gma06g00468 1023 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 57 1014 IPR003437 GO:0004375|GO:0006544
Gma06g00468 1023 Coils Coil 682 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00468 Gma-Chr6 3983390 3989824 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00468 K00281 - gmx:100814366 2052.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00468 06 3983390 3989824 Gma06g00468 06 3983390 3989824 ECH