Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00452 ATGGGAAAAACTAAGGTTGCAATCTTGTTGCTTTGGGTCTTGTGTATCAAATTGCAGTTGAATGTTGAAGCAAGAACATCATCAGCTTTAGAAACAGAAATCGAAGCCAAATTGAAGCAACTCAACAAGCCTGCCGTGAAAACCATTAAGAGTGAAGATGGAGATATTATTGATTGCGTCAACATCTACGATCAACCTGCTTTTGATCATCCAGCCTTAAAAAACCACACTATTAAGATGATGCCCGATTTTTTGCTAGAATCCCAAAATCCAAGCACAGAAGATGCTTCTGAGTCAGTGATATTTCAGACATGGCAAAAAAGTGGAAGCTGTCCAAAAGGAACCATTCCTATTCGCAGAATTCTAAAGGAAGACTTACTCAGAGCTTCTTCTCTTGGCCGATTTGGGCAGAAACCCCCAGCTTCTCTCAATTTTTCCAATGCCGACAGTGAATTTATTCCTGTAAATCGCTCGTCATCATATCTTGTGACATTGGGATACAATTATATCGGTGCAGAAGCAGACATCAACGTTTGGAATCCAAAGGTTACCATGCCAAACGATTTCACCACAGCTCAAATCTGGCTTAAGAACAACAACGGTGAAGTTTTTGAAAGTGTAGAATCAGGTTGGATGGTGAATCCAAAGTTATATCATGACGGAGccacccggttttttgtctcctggactAGGGATTCATACAGGTCAATAGGTTGCTTTGATCTTACTTGTCCAGGATTTGTGCAAACAGGCCAAGTAGCCCTTGGTGCTAGCATAGGACCTATATCATCCATTATGGGCCCACAGTATGAGCTTAACGTTGGACTGTTCCTGGAACCAGACTCAGGAAATTGGTATCTTAAAATTAAGAACAACGTCCCAGTGGGTTATTGGCCGGCTGAAATATTGGGTTCTTTAACGCACAGTGCCATATTGGTTGAATGGGGTGGACAAGTATCAAGCACAAATATAAAGAATCATGAAAGCCCTCACACGGGAACAGAAATGGGAAGTGGACATGCCGCAAGTGGTCGATTTCAGAACGCGTGCTTCATGCGCAATGTGAGGATTAAGGATTATTCGCTACAGCTTAAGTATCCTGAGCATGCATATGCTATGGCTGAAGAGCCCTACTGTTACAGCTCCCTCAACGACGTCCATTATGGGAAGGAACCTGTCTTTTATTTTGGAGGACCCGGACGAAACCCACCCTTTTGTCCTTAA 1224 0.4167 MGKTKVAILLLWVLCIKLQLNVEARTSSALETEIEAKLKQLNKPAVKTIKSEDGDIIDCVNIYDQPAFDHPALKNHTIKMMPDFLLESQNPSTEDASESVIFQTWQKSGSCPKGTIPIRRILKEDLLRASSLGRFGQKPPASLNFSNADSEFIPVNRSSSYLVTLGYNYIGAEADINVWNPKVTMPNDFTTAQIWLKNNNGEVFESVESGWMVNPKLYHDGATRFFVSWTRDSYRSIGCFDLTCPGFVQTGQVALGASIGPISSIMGPQYELNVGLFLEPDSGNWYLKIKNNVPVGYWPAEILGSLTHSAILVEWGGQVSSTNIKNHESPHTGTEMGSGHAASGRFQNACFMRNVRIKDYSLQLKYPEHAYAMAEEPYCYSSLNDVHYGKEPVFYFGGPGRNPPFCP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00452 407 Pfam Neprosin activation peptide 48 149 IPR025521 -
Gma06g00452 407 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 14 403 - -
Gma06g00452 407 Gene3D - 176 292 - -
Gma06g00452 407 Pfam Neprosin 187 399 IPR004314 -
Gma06g00452 407 PANTHER ASLB (DUF239)-RELATED 14 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00452 Gma-Chr6 3896100 3899238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00452 - - gmx:100804570 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00452 06 3896100 3899238 Gma06g00452 06 3896100 3899238 ECH
Gma17g02212 17 39840727 39844534 Gma06g00452 06 3896100 3899238 PCT
Gma14g00836 14 8958084 8961782 Gma06g00452 06 3896100 3899238 PCT
Gma06g00452 06 3896100 3899238 Gma17g02212 17 39840727 39844534 PCT
Gma06g00452 06 3896100 3899238 Gma14g00836 14 8958084 8961782 PCT