Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00422 ATGGTGTTTGGGCAAATAGTGGTTGGTCCTCCTGGCTCTGGCAAAACAACTTACTGCAATGGCATGTCTCAGTTTCTTAGTCTTATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCTGCTAATGATTCGTTACCATATGATTGTGCTGTGAACATTGAGGATCTTGTGAAACTAAGTGATGTAATGGTGGAACATTCGCTTGGACCAAATGGGGCAGGTCTTGTGTATTGTATGGATTATCTTGAGAAAAATATTGACTGGTTGGAAGCAAAATTGGAACCTCTTCTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGAACTTTTTTTTCTCCATTCAAGTGCCAAGAATGTCATCCTGAAGCTCATAAAGAAATTGAACCTAAGGTTAACTGCAGTGCATTTGATTGATGCCCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGCTTTTATCCTTGTCCACAATGCTACATCTAGAACTCCCTCACATAAATGTCTTGTCAAAAATTGATTTAATTGAGAGCTATGGAAAGCTAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCATATTTACAATACCATCTTGATCAGGATCCTCGCTCTGCTAAGTACAGAAAGCTCACAAAGGAATTATGTGATGTTATTGAAAACTTCAGTCTTGTAAGCTTTTCAACCTTAGATATTCAGGACAAAGAGAGTGTAGGGAATTTAGTGAAGCTGATAGACAAAAGCAATGGGTACATATTTGTTGGGATGGAAACAAGTGCAGTTGAATTTAGCAAGATTGCGGTTGGTCCTGTTGATTGGGATTATTATAGATATCCTTTTTTTCCTCATGTGTATATTCTGATACCTCTGGATGATTTACTATAG 903 0.3832 MVFGQIVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYDCAVNIEDLVKLSDVMVEHSLGPNGAGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSSAKNVILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGKLAFNLDFYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIENFSLVSFSTLDIQDKESVGNLVKLIDKSNGYIFVGMETSAVEFSKIAVGPVDWDYYRYPFFPHVYILIPLDDLL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00422 300 PANTHER GPN-LOOP GTPASE 2 1 282 IPR030231 -
Gma06g00422 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 256 IPR027417 -
Gma06g00422 300 CDD GPN2 3 253 - -
Gma06g00422 300 Gene3D - 4 265 IPR027417 -
Gma06g00422 300 Pfam Conserved hypothetical ATP binding protein 7 256 IPR004130 -
Gma06g00422 300 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 282 IPR004130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00422 Gma-Chr6 3603114 3605651 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00422 K24104 - gmx:100799782 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00422 06 3603114 3605651 Gma06g00422 06 3603114 3605651 ECH
Gma04g00431 04 3739856 3743214 Gma06g00422 06 3603114 3605651 GST