Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00406 ATGGACCCATCTATAGTGAAGCTTCTGGAAGATGACGAGGATGAAAGTATGCACTCAGGGGCAGACGTGGAAGCATTCCAGGCTGCATTAAATAGAGACATAGGAGGAGATACTTCGACTTCTCAGTTGTCTGGTTCAGACACAGGAAGCAATAATTCATTAAGCCAGTCATTACCAAAGCAGCCAACTTCTACCCATGACAAGCAAAGTGACTGTCAAAATCAAGAGCCTAAAGTTGTGCAGCAGCAAGAGCAACAACATTCGTCTGAAATGGAGCAGAAGCCACAGCAACCTCTTGTTGAACAACTACAGAATGCTGCTTCTCAGGATGCCAATAATCTCCCTTCATCTCAGAAACAATCTCAAGATGAAAGTGCTCAAGGCCATACTGCACAAGCTCCCCACCAAAATTCTCAAACAAATGTAACTCAGAATTCTGAAAAAGATCCTGTCTTCAACCATGAGGCAGTCAACACACATAATCCTAACCATGAATCTCAGTATGCAAAGCTGCAGCAAATGAGTAATCAACAGGCCACTGTCAAGGAACAGCCTGGAAGTCAGGTCGATCGGAATAAACAGGTACCATTTGCCATGTTGCTCCCTATGTTGATTCCCCAGCTTCCCAAAGACAGAGCCATGCAACTTCAAACTTTATTTAATAAATTGAAGAAAGATGAAATGCCCAAAGATCAGTTTGTGCGGCTTATGAAAGGTATTGTAGGGGATCAGATGCTTAGATTAGCATTAACGAAAGTGCAATTACAGACAAGATCCAACCCAGCACCCACTGGGCAGCAGCATCCTCATGTAAGGACGCCAAATGTTAATTCAGGTGCAACAAAATTTAATGATCCCCATGCATTAGCCCATCTGCATCAGAGAAGTATGAATGCTGCTGCAGATCAATCTAATAATACTTCTTCAGCCGTCCAAGTAAAGAATGAACCAACCTATCCAACTATGGACATTAATGCTAAAAAATCTCGGGAACTGGATGTTCAAGTAGAATCTCAAGGAGCGCAACTAAATCAGTTACCATCATCCAGTTCTAATGCTGTTAGTCAAGAAACGGAAAGATCCTCACTTCACTTACAAGGCCTTAATAAGGAGCAACAACAGCATCTACATTTCCCTTCAGCATATGGTAACAGTGGTGGTAATTATAACCCTTTTTCGGGCTCAACCAGTAGTTCCACATCATCTATCAGACCACAACCTTTTGATTCACACATGAGGCAAATTCCACATCAGAGCATCAGTCCAAATCAATTAGGTGGGTCAACACAGGGTTTGATTGGTTTGACAAAACTTGATCAGCAAAATTCTTTCAATGATCCCAAGAGAATGCCTGGTGGATTTGTGTCCCCTGTGGCAAACAATACAACATCACAACAAACATCAAATTCTTGGCAACCATCAGCAAACAAAGAACAAAGTTCAGGCTCGTTTTCATCTGTTCCATATGTAAAAAAGGAGCCTAATGACCTGTCTACCGAGCAGCAACACAGGCATAATTTGTCTAAATTGCACGGGCTGCATTCTGTTAATTCTGTGCAAAATGAACAGGGTAGCAGTGCCAATCAAGGCACCCTAAAGGAGGAGTTTTCAAGAGGCTTTCCAGCATCCACAAGTATGCCGCATACAACATCTAGCTTGCTGCCTCTCAATTCTGCTTCCCCTTCTGTATCTCAACTTGACCCTAGTGCCACTTTAAGCCCTCAGATCCCATCAAACACGTCTGTTATAAATGCAAGGACACCTCTGAAAAAGCCTTCTCCTGGCCAGAAGAAACCAATTGAAGCACTTGGTTCTTCACCTCCTCCTCCAAGTAAGAAACAAAAAGTGTCTGGGGCATCTCTTGAGCCAAGCATTGAACAACTTAATGATGTTACTGCTGTTAGTGGTGTTGATCTTAGGGAGGAGGAAGAACAATTATTTTCTGGGCCCAAGGAGGACAGTCGAGCTTCAGAAGCATCTCGCAGAGTTGTGCAAGAAGAGGAGGAAAGTCTGATTTTGCAGAAAGCTCCATTGCAAAGAAAACTGATTGAGATTATAAATGAGTGTGGCTTGAAGGGTGTGAGTAATGATTTGGAGAGATGCTTGTCACTGTGTGTGGAGGAAAGAATGCGTGGAGTAATAAGTAATGTGATTAGAATGTCAAAACAGCGGGTTGATTTGGAGAAGACAAGCCATCGGACTGTTGTCACTTCAGATGTACGGCAGCAAATCCTAACAATGAATAAGAAGGCAAGGGAAGAATGGGAGAAAAAACAGTCAGAAACAGAGAAGCTCCGGAAACTAAATGATGTAGATGGTAATGCTGGGATTGATGGTGACAAGGAGAAAGATGAGGGTCGGACTAAAGCAACAAAGGTGAACAAAGAAGTGGATGACAAGATGAGGACAAATGCTGCTAATGTTGCTGCCCGAGCTGCTGTTGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAGACAGAAGAAACGTGGTGGGGGAATGGATGCTTCATCTGGTTCTCAACCAGCTAAAGATGTGAGCCAGAAATCTTCATCAACATCAGGAAGGAGTACAAAAGATAATCAGGGGCTGGTAGAAAATTTGGGAGAAGTCATGCCACGACACCTCAAAATAGCATAG 2655 0.432 MDPSIVKLLEDDEDESMHSGADVEAFQAALNRDIGGDTSTSQLSGSDTGSNNSLSQSLPKQPTSTHDKQSDCQNQEPKVVQQQEQQHSSEMEQKPQQPLVEQLQNAASQDANNLPSSQKQSQDESAQGHTAQAPHQNSQTNVTQNSEKDPVFNHEAVNTHNPNHESQYAKLQQMSNQQATVKEQPGSQVDRNKQVPFAMLLPMLIPQLPKDRAMQLQTLFNKLKKDEMPKDQFVRLMKGIVGDQMLRLALTKVQLQTRSNPAPTGQQHPHVRTPNVNSGATKFNDPHALAHLHQRSMNAAADQSNNTSSAVQVKNEPTYPTMDINAKKSRELDVQVESQGAQLNQLPSSSSNAVSQETERSSLHLQGLNKEQQQHLHFPSAYGNSGGNYNPFSGSTSSSTSSIRPQPFDSHMRQIPHQSISPNQLGGSTQGLIGLTKLDQQNSFNDPKRMPGGFVSPVANNTTSQQTSNSWQPSANKEQSSGSFSSVPYVKKEPNDLSTEQQHRHNLSKLHGLHSVNSVQNEQGSSANQGTLKEEFSRGFPASTSMPHTTSSLLPLNSASPSVSQLDPSATLSPQIPSNTSVINARTPLKKPSPGQKKPIEALGSSPPPPSKKQKVSGASLEPSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRASEASRRVVQEEEESLILQKAPLQRKLIEIINECGLKGVSNDLERCLSLCVEERMRGVISNVIRMSKQRVDLEKTSHRTVVTSDVRQQILTMNKKAREEWEKKQSETEKLRKLNDVDGNAGIDGDKEKDEGRTKATKVNKEVDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKKRGGGMDASSGSQPAKDVSQKSSSTSGRSTKDNQGLVENLGEVMPRHLKIA 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00406 884 MobiDBLite consensus disorder prediction 335 362 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 297 362 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 642 662 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 845 869 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 456 488 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 825 884 - -
Gma06g00406 884 Pfam RCD1-SRO-TAF4 (RST) plant domain 192 254 IPR022003 -
Gma06g00406 884 MobiDBLite consensus disorder prediction 610 625 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 1 146 - -
Gma06g00406 884 ProSiteProfiles RST domain profile. 188 259 IPR022003 -
Gma06g00406 884 MobiDBLite consensus disorder prediction 33 146 - -
Gma06g00406 884 CDD TAF4 624 822 IPR007900 GO:0005669|GO:0006352
Gma06g00406 884 MobiDBLite consensus disorder prediction 297 319 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 378 447 - -
Gma06g00406 884 PANTHER IP01149P-RELATED 379 863 - -
Gma06g00406 884 PANTHER IP01149P-RELATED 40 361 - -
Gma06g00406 884 Pfam Transcription initiation factor TFIID component TAF4 family 628 868 IPR007900 GO:0005669|GO:0006352
Gma06g00406 884 Gene3D Histone, subunit A 673 718 IPR009072 GO:0046982
Gma06g00406 884 MobiDBLite consensus disorder prediction 751 798 - -
Gma06g00406 884 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 40 361 IPR045144 GO:0005669|GO:0006352
Gma06g00406 884 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 379 863 IPR045144 GO:0005669|GO:0006352
Gma06g00406 884 MobiDBLite consensus disorder prediction 166 190 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 542 587 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 378 504 - -
Gma06g00406 884 MobiDBLite consensus disorder prediction 538 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00406 Gma-Chr6 3489314 3495581 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00406 K03129 - gmx:100797127 1647.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00406 06 3489314 3495581 Gma06g00406 06 3489314 3495581 ECH