Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00384 ATGGGCGGCGTTGCAGCGGTAACCATTGACGACATCCCCGACAACTGCTTGGCTTGCATTTTCCAGTTATTTCCCCCCGCCGACCAGAAGAAGTTGTCCCTCGTTTGTCGCCGCTGGCTCAAGGTTGAAGGACATACCCATCACCGTCTCTGCCTCACCCTTCCTTACTCATCAGTCCTTGCATCTATTTTTTCTCGTTTCGACTCCGTCACCGACCTCACTCTCCAATGCCCTAATCTCATGAGCATGTGCGACGGAAATCTAGTCGTCATTTCAGACCTCTGCCCTAATCTCATTCGCCTCCAAATCACCAAGTGCTCCTATCTCTCCTACGCTGGCTTGGAGGTCTTAGCCAGGAGTTGCGAGCGTTTAAAAAGTTTCTCTTGTACATCTTGCACTTTTGGACCCAACTCCATTGACGCACTTATACATCATTGCACTACTCTCGAACAACTCTCCATCGAGTATTCTACTGTCACAACCCACGGAGCTCAATTCCTAAATTTCTATCCTTTGATTCGCGCCAAGAATTTGACTACTGTGAAGATTGTTCAGTGCTCTGTTGAGGAGTACTGGGATATGTTTTTTCATTCGTTGGCGAGCCAGGTTACGAGCTTGCTGGAAGTCCACCTCGATGGGTGCGGAGTTAGCGATAATGGTTTGAGAGCGATTTCAAAATTACCAAATTTAGAAACTCTGCATCTGGTGAAGACCCATAAGTGCACCCACGCAGGACTGGTTGCAGTTGCGGAGGGATGCAACAAGAGTTTAAGAAAACTTTGTATTAATGTGTCAGATTGGAAGGGCACCAACAAAATAGGTGACAAAGGTTTGATAGCGTTTGCTAAGTGTTGTAGTAATCTTCAAGAATTGGTTCTCATTGGTATGAATCCAAGCAAAGCGAGTTTGAAAATTTTGGCATCCAATTGCCAGAGTCTAGAGCATTTGGGGTTGTGGGGAAGCAATAAGTTTGGCGACACTGAGATATGCTGCATTGCTGGAAAATGTGTGGCGTTGAAGGAACTCCACATCGAGCGTTGCCCACGTGTTTATGATCGTGACATCAAGACGTTGGCTGCTAAGTGTCCCAATTTGGTGAGAGTGAAGGTTTTCGAATGTAAATGGGTCACTGAAAGGGATGAGTACGTGCGCTACCACCGCCGTTTAGTACATGTGACTTGCAAGCCACGTACTGCATGTCGATCACCCTTGTAG 1215 0.4691 MGGVAAVTIDDIPDNCLACIFQLFPPADQKKLSLVCRRWLKVEGHTHHRLCLTLPYSSVLASIFSRFDSVTDLTLQCPNLMSMCDGNLVVISDLCPNLIRLQITKCSYLSYAGLEVLARSCERLKSFSCTSCTFGPNSIDALIHHCTTLEQLSIEYSTVTTHGAQFLNFYPLIRAKNLTTVKIVQCSVEEYWDMFFHSLASQVTSLLEVHLDGCGVSDNGLRAISKLPNLETLHLVKTHKCTHAGLVAVAEGCNKSLRKLCINVSDWKGTNKIGDKGLIAFAKCCSNLQELVLIGMNPSKASLKILASNCQSLEHLGLWGSNKFGDTEICCIAGKCVALKELHIERCPRVYDRDIKTLAAKCPNLVRVKVFECKWVTERDEYVRYHRRLVHVTCKPRTACRSPL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00384 404 Pfam Leucine Rich repeat 204 225 IPR001611 GO:0005515
Gma06g00384 404 Gene3D Ribonuclease Inhibitor 49 401 IPR032675 -
Gma06g00384 404 PANTHER F-BOX/LRR-REPEAT PROTEIN 8-RELATED 170 388 - -
Gma06g00384 404 PANTHER F-BOX/LRR-REPEAT PROTEIN 8-RELATED 8 154 - -
Gma06g00384 404 SUPERFAMILY RNI-like 42 376 - -
Gma06g00384 404 SUPERFAMILY F-box domain 7 42 IPR036047 GO:0005515
Gma06g00384 404 SMART LRR_CC_2 95 120 IPR006553 -
Gma06g00384 404 SMART LRR_CC_2 310 335 IPR006553 -
Gma06g00384 404 SMART LRR_CC_2 285 309 IPR006553 -
Gma06g00384 404 SMART LRR_CC_2 228 252 IPR006553 -
Gma06g00384 404 SMART LRR_CC_2 203 227 IPR006553 -
Gma06g00384 404 SMART LRR_CC_2 336 361 IPR006553 -
Gma06g00384 404 ProSiteProfiles F-box domain profile. 6 42 IPR001810 GO:0005515
Gma06g00384 404 PANTHER UNCHARACTERIZED 170 388 - -
Gma06g00384 404 PANTHER UNCHARACTERIZED 8 154 - -
Gma06g00384 404 Gene3D - 9 46 - -
Gma06g00384 404 Pfam F-box-like 9 43 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00384 Gma-Chr6 3303522 3304736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00384 - K10273 gmx:100791336 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00384 06 3303522 3304736 Gma06g00384 06 3303522 3304736 ECH