Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00314 ATGACCAACAATGAGGGGAGACCACCGATATTCCTTTCCAAGTTGGTCTGTCAGAAGTGGATCTATTGGAAGACGTTAAAATCCAGTTTATCCGGGGTGGACAAGTCCATTGCTGCCATGTATAAGAAGTTGCAGAAGAACTTGACTTCGGAGGAACTATTACCTTCCTTATGGGATAAATGCAAGAATGATTTTCTTGATAAGTACGAAACCTTTGTTCAACTTGTCGCGAGGATTTACCCTGCTGAGTCGGTCCCTTCTGTAGCAGAGTTGCGAGTCCTTTTAGCTTCCATGTAA 297 0.4343 MTNNEGRPPIFLSKLVCQKWIYWKTLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKNDFLDKYETFVQLVARIYPAESVPSVAELRVLLASM 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00314 98 PANTHER SEC3/SYNTAXIN-RELATED 19 98 - -
Gma06g00314 98 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 19 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00314 Gma-Chr6 2742868 2744583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00314 24 98 EF-hand Containing Proteins AT1G47560 82.667 4.25e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00314 K19983 - ccaj:109790967 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00314 06 2742868 2744583 Gma06g00314 06 2742868 2744583 ECH
Gma04g00328 04 2808577 2821615 Gma06g00314 06 2742868 2744583 GST
Gma17g02361 17 41664221 41679399 Gma06g00314 06 2742868 2744583 PCT
Gma14g00676 14 6645488 6650850 Gma06g00314 06 2742868 2744583 PCT
Gma06g00314 06 2742868 2744583 Gma17g02361 17 41664221 41679399 PCT
Gma06g00314 06 2742868 2744583 Gma14g00676 14 6645488 6650850 PCT