Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00311 ATGGCATCAGCTAAATGGTTATTCAAGATAATAACGTTTCCATGCATAACTCCTCCCAGGCCCAAATCATTACCGGCAATAGACGGTGACACCACTACACCACCTCCTCTAATTGGGCCTTCGGGCCCAAAAGACGACGATGAGAGGCTCAAAGACGTTTTTGATCACTTGGACATTGACAAAGATGGAAAGATTTCGAGCAGCGAGTTAATGGATTATTTCGCGTCCGTGGGTGAGTCCCTGAGCCATAAAGTGGCAGAGAGAGTGATAAACGAGTTTGACTCCGATGGTGACGAGTTACTCGATTTCGGAGACTTTGAGAAACTGATGAAGCAAGAGGACAGTGAGGAATTGGAGGATGTTCTGAGAAGCGCGTTCGAGATGTTCGAGGTTGAGAAAGGGTGTGGGTGCATAACGCCCAAGGGCTTGCAACAAATGTTGCGCCAACTAGGAGACGTCAAGTCCCACGACGAGTGTGCGGCCATGATTCAAGCATTCGATCTTGACGGCAATGGCTTCCTTGATTTCAACGAATTTCAGCAGATGATGTCTCCAGCTTCTTAG 564 0.4787 MASAKWLFKIITFPCITPPRPKSLPAIDGDTTTPPPLIGPSGPKDDDERLKDVFDHLDIDKDGKISSSELMDYFASVGESLSHKVAERVINEFDSDGDELLDFGDFEKLMKQEDSEELEDVLRSAFEMFEVEKGCGCITPKGLQQMLRQLGDVKSHDECAAMIQAFDLDGNGFLDFNEFQQMMSPAS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00311 187 ProSiteProfiles EF-hand calcium-binding domain profile. 45 80 IPR002048 GO:0005509
Gma06g00311 187 SUPERFAMILY EF-hand 35 183 IPR011992 -
Gma06g00311 187 ProSitePatterns EF-hand calcium-binding domain. 167 179 IPR018247 -
Gma06g00311 187 ProSiteProfiles EF-hand calcium-binding domain profile. 154 187 IPR002048 GO:0005509
Gma06g00311 187 Gene3D - 113 186 - -
Gma06g00311 187 SMART efh_1 49 77 IPR002048 GO:0005509
Gma06g00311 187 SMART efh_1 85 113 IPR002048 GO:0005509
Gma06g00311 187 SMART efh_1 158 186 IPR002048 GO:0005509
Gma06g00311 187 Gene3D - 43 112 - -
Gma06g00311 187 ProSitePatterns EF-hand calcium-binding domain. 58 70 IPR018247 -
Gma06g00311 187 MobiDBLite consensus disorder prediction 22 48 - -
Gma06g00311 187 ProSiteProfiles EF-hand calcium-binding domain profile. 81 116 IPR002048 GO:0005509
Gma06g00311 187 PANTHER CALMODULIN 34 184 - -
Gma06g00311 187 PANTHER CALCIUM BINDING PROTEIN 34 184 - -
Gma06g00311 187 Pfam EF-hand domain pair 48 111 IPR002048 GO:0005509
Gma06g00311 187 Pfam EF-hand domain pair 121 184 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00311 Gma-Chr6 2736595 2737517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00311 31 184 EF-hand Containing Proteins AT3G50770 49.112 3.07e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00311 K13448 - gmx:100775336 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00311 06 2736595 2737517 Gma06g00311 06 2736595 2737517 ECH