Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00292 ATGATCCCCGTGTCCTGTTTCTGCGTTTCAACTTCTTCCTTTCAGCGCAGGAGCAATTTGCAGCCGAGCCAGGAAAGCGAGGAGCATTATTCTGAATCGAAGATTAAAGAGGTTAAGGATGCAATCGAGCCCTTATCTGGACGAAGCTTGAAGTACTGCACTGATAATTGTCTGAGGAGATATCTGGAAGCTCGTAATTGGAATGCGGACAAGTCGAAGAAGATGTTGGAGGACACACTCAAGTGGAGATCAACGTATAAGCCTGAGGATATTCGCTGGGATGAGGTTGCCATGGAAGGAGCAACAGGGAAGTTGTACAGAGCTAGTTTTCATGACCGTGAAGGAAGGATAGTCCTTGTATTGAGGCCTGGAATGCAGAACACATCTTCAATAGAGAATCAGATGCGACATCTGGTGTATATGCTGGAAAATGCTATGCTTAACCTTCCACAAGCATTTTGGAAGATAATCAAGTACATGTTAGATAAGAAGACAATTCAGAAGGTGAAGTTCGTCTACCCCAACAACAAAGATAGCGTGGAGCTGATGAAATGTTATTTTGACGAGGAAAATCTTCCCATAGAATTTGGAGGAAAAGGGATACTGAATTATAACCATGAGGAGTTCTCCAGATTAATGGCTCGGGACGATTTGAAATCTGCTGCCTTTTGGGGATCTGAATCTGATGACAAGCTCTCAAGTTACGTTGGTAATAAGAGTCATTCTGGAGCAGAGGTAGCCCCAGAGCCAGCTTTATGA 759 0.4387 MIPVSCFCVSTSSFQRRSNLQPSQESEEHYSESKIKEVKDAIEPLSGRSLKYCTDNCLRRYLEARNWNADKSKKMLEDTLKWRSTYKPEDIRWDEVAMEGATGKLYRASFHDREGRIVLVLRPGMQNTSSIENQMRHLVYMLENAMLNLPQAFWKIIKYMLDKKTIQKVKFVYPNNKDSVELMKCYFDEENLPIEFGGKGILNYNHEEFSRLMARDDLKSAAFWGSESDDKLSSYVGNKSHSGAEVAPEPAL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00292 252 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 105 204 IPR001251 -
Gma06g00292 252 Gene3D - 150 221 IPR036865 -
Gma06g00292 252 Pfam CRAL/TRIO, N-terminal domain 52 78 IPR011074 -
Gma06g00292 252 Gene3D - 9 149 IPR036865 -
Gma06g00292 252 SUPERFAMILY CRAL/TRIO domain 93 211 IPR036865 -
Gma06g00292 252 SMART CRAL_TRIO_N_2 54 79 IPR011074 -
Gma06g00292 252 SUPERFAMILY CRAL/TRIO N-terminal domain 29 95 IPR036273 -
Gma06g00292 252 SMART sec14_4 99 201 IPR001251 -
Gma06g00292 252 MobiDBLite consensus disorder prediction 228 252 - -
Gma06g00292 252 CDD SEC14 111 199 IPR001251 -
Gma06g00292 252 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 151 250 - -
Gma06g00292 252 Pfam CRAL/TRIO domain 151 198 IPR001251 -
Gma06g00292 252 PANTHER GH16843P 151 250 - -
Gma06g00292 252 PANTHER GH16843P 21 151 - -
Gma06g00292 252 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 21 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00292 Gma-Chr6 2538571 2541025 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00292 - - aprc:113847293 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00292 06 2538571 2541025 Gma06g00292 06 2538571 2541025 ECH