Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00285 ATGGGCGAACAGACGCTAGGTCAAGCACAACCCCTCCCCGCCCCCGATGCTGCCACGGCCCACTCCGAACTAAACAATGTCCCTCAGCCGACAACCTCCCCAGCTACGAAAATCCCCCTCCGTCCCCGCAAGATCCGGAAGGTCTCTCCGGACCCCTCCACCTCCGAAGCCCCCATCAAACCCGCCAAACCTGTTGGCCGCAACACCACCTCCAAGGCTGCTCCGCCTCGAGCCCTGACTGTGGTCCCTCGCATAGTGGCTCGCTCACTCTCCTGCGACGGCGAGGTCGAGATCTCGCTCCGCTACCTCCGCAACGCGGACCCCCTCCTCTCCCCTCTGATCGACATTCACCAACCCCCAACCTTCGACAATTTCCACACTCCCTTCCTCGCCCTAACCCGCAGCATCTTGTACCAGCAACTCGCGTTCAAAGCCGGCACCTCCATCTACACGCGCTTCATCGGCCTCTGCGGCGGCGAAAACGGCGTCGTTCCCGAAACAGTTCTCGCCCTTACTCCCCAACAGCTTCGGCAGATTGGGGTTTCGGGGCGGAAGGCCAGTTACCTTCACGATTTGGCCAGGAAGTACCAGAACGGGATACTCTCCGATTCCGCCATTGTGAACATGGATGACAAGTCGCTCTTCACCATGCTTACCATGGTCAATGGCATTGGCTCTTGGTCTGTTCACATGTTCATGATTTTCTCACTCCACAGACCCGATGTTCTCCCCATCAATGACCTTGGTGTCAGGAAAGGGGTTCAGCTTCTCTACAACCTCGAGGACTTGCCGCGGCCCTCGCAGATGGACCAGTTGTGTGACAAGTGGAGGCCTTATCGGTCTGTTGCTTCGTGGTATATGTGGAGATTTGTTGAAGCCAAGGGAACTCCTTCGAGTgcggtgacggtagcgactggtgccggcttgcagcagcagcgccatcaccagcatcaacaacaggagcaacagcagcagcaacacgctccacagccacagcTTCTGGATCCCATAAATAGCATGTTTAATCTTGGGGCTGCCTGTGCTTGGGGACAATGA 1056 0.5189 MGEQTLGQAQPLPAPDAATAHSELNNVPQPTTSPATKIPLRPRKIRKVSPDPSTSEAPIKPAKPVGRNTTSKAAPPRALTVVPRIVARSLSCDGEVEISLRYLRNADPLLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVTVATGAGLQQQRHHQHQQQEQQQQQHAPQPQLLDPINSMFNLGAACAWGQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00285 351 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 23 345 - -
Gma06g00285 351 Gene3D - 102 289 - -
Gma06g00285 351 PANTHER BNAC05G15000D PROTEIN 23 345 - -
Gma06g00285 351 CDD ENDO3c 129 290 IPR003265 GO:0006284
Gma06g00285 351 MobiDBLite consensus disorder prediction 303 329 - -
Gma06g00285 351 Gene3D Hypothetical protein; domain 2 126 239 - -
Gma06g00285 351 MobiDBLite consensus disorder prediction 1 74 - -
Gma06g00285 351 MobiDBLite consensus disorder prediction 22 36 - -
Gma06g00285 351 Pfam HhH-GPD superfamily base excision DNA repair protein 134 276 IPR003265 GO:0006284
Gma06g00285 351 SUPERFAMILY DNA-glycosylase 118 290 IPR011257 GO:0003824|GO:0006281
Gma06g00285 351 SMART endo3end 137 292 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00285 Gma-Chr6 2486375 2490347 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00285 K01247 - gmx:100788160 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00285 06 2486375 2490347 Gma06g00285 06 2486375 2490347 ECH
Gma04g00299 04 2557389 2562284 Gma06g00285 06 2486375 2490347 GST